Detail



ID : Ahg356183

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356183|fgenesh1_pg.C_scaffold_7003356
Sequence
ATGGCAGATT CCGACATGAG GGTACCAATT GTTAAGTCGT CTTTAGTTGT GGAGGCTATG CACATGTCAA TAAAGAAACT TGGTGTGTAC GATGAGAGCA GAGGAGATTC AGAGACTGCA AAAGCTAGAG CAGAAGCGGG ATTGTCCGAG GTAAAGAAGT CGGGATTACT TATAGAGATG TTGAACCGTG GTCCGGAGTT TAAGGAAAAA GATATGGAAG TGTTGAAGAT CGAGGAAAAG TACGCGGAAG TTATGAGAGT TTTGGAGGCT GTGAAAGAAG AAGTGAGTAG AGTGAAGCTT AATGTATCAT CTGTTTTGGG AGAGAGAATT GCAGCGGAGA AAGAAGTCGA AGAATTGCGG TTTAAAACGG AAGGGAATTT GAGATTGTTG GAGAGTCTTA AGAAGGAAAT CGAGGTTGCG AATGAGGAAC ATTTGACGGC TGCATTGGGA AAGATTGAGG CGTTGAAGGG ATATAAAGAG ATAGAAAGGC AGAGAGAAGG GAAAGCTGTT GAGGTTTTGG ATTTGTTGGT GGAAAGGAAT AAGAGAATCA AGAAAATGTT GGACGAGGCG GAAAGATCGA AGGATATTGA GAATGAGTTG TTTGAGACGA ATTCGGATGT TGAGATGTTG GAAATACAGC TAAAGCTTTT CAAGAAAATG GAGAGGAGAG TTCAGGGGAG AGACAGTAGC ATGTCGAGAT CAAACCGGTC TTTTGGAAGA GGGAAGTATA GTTTATCGGT GCTGAAAGAA GTGACTGAAG CGACTGAAGC GAAAAAGGAG GAGCTTGCTT CTGTTAATGT AGAAATCTTT AGGATCATGA CGGTAATGGA TGCGTTGAGG GATGAGATTA TTCGAGCGGA AGATGAAATA GCTCGACTTG AAAAAATCTT AAGGAAAGAT GATGTTAAGA TTCAGAAGCT TAACTCGAAG ATGCTTATCG AAAGATCGAA GTTGGAAGCA GTTTCTATTG CCGAAGAAAG AATTAGCTCG CTTGCTGACA ATTTATTTGG TTCGCTTGAG AAGTTAAAGA AAAGTAGGAA AGCTGCAAAG AAAGAGGAGT TTTTTCTCAA AGATGAGAAG ACGGTTACAA AGGCGGAAAC ACAGAAAACC AAAATCGAAA TAGATAAAAA AGAAAGAGAA CTGATTTCAA AGTTGGATGA GCTTGAAAAA GTGAAGCACA CTGAGGGTTT AGTGCTTGAG AAGCTTGAGA CTCTAGTAGA AGACACGATG GAGAGTCGCG AAATGGAGTC TGAGCATTGT TCAACAATCA CAATCTCGAG GTTTGAGTAC GAGTATTTGA GTAAACATGC TTCTCAAGCA GAAGAAACCG CAGTGAAGAA AGTTGCAGCA GCAGAGGCAT GGGTGGAAGC ACTCAAGGTT AGCACCAAAT CGGTTCTTCT GAAGTCGGAT ACTTTGATGA GAGAAAGTGA AATGATGAGA GTGGAAGAAG AGAAAGAATT GTTTAGGATG GAAAGGTCGT TGTCGACGAA GAGATTGATG GAGGGTGAGA TTCAGAAGTT TAAGGAGAAC TCGGAAACCA AAGGCTATAT TTCTCCCAAA CCAGATGGAA AATTCACACC GGTACAACGT GGGAAGCCAA GAAGATATTC ATCTGCAGGA ACTCCAACTT TCTTTGTAAT CAAGAAGAAA AAGAAAATTC CACGCTTGGC CAAGTTTTTT AGTCGAAAAA GTTAA 
Length1695
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22856494.. 22858302
Download Sequence
A.thaliana
AGI-codeAT5G38150.1
DescriptionPlant protein of unknown function (DUF827)
TAIR curator summaryInvolved in chloroplast avoidance movement under high-light intensities
Alias[PMI15][plastid movement impaired 15]
Gene coexpression
MR
MR Locus Description
8.60233 Ahg925532 YCF9
11.4891 Ahg486976 Protein of unknown function (DUF3527)
13.6748 Ahg338905 DNA LIGASE 6
34.5832 Ahg481650 dephospho-CoA kinase family
39.4968 Ahg480812 nucleic acid binding;zinc ion binding;DNA binding
45.8367 Ahg483529 Ankyrin repeat family protein
54.1664 Ahg474663 CBS domain-containing protein / transporter associated domain-containing protein
66.4078 Ahg488423 RING/U-box superfamily protein
68.1762 Ahg945006 pathogenesis related homeodomain protein A
71.624 Ahg485718 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression