Detail



ID : Ahg470802

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470802|fgenesh2_kg.1__756__AT1G07720.1
Sequence
ATAAAAACAA TAATGGATCT TCTTGTTATG CTCTCCTCTC TTCTCATCTC CTATCTCATC TTCAAGATCT GGAAACACAT AGACTCCAAG AGAGATCAAA ACTGCTACAT CTTGGACTAC CAATGTCACA AACCTTCCGA TGATCGTATG GTGAGCACTC AATTCAGCGG TGATGTCATC CTTCGAAACA AACACCTTCG TCTCAACGAG TACAAGTTCC TCCTCAAAGC CATCGTTAGT TCCGGTATCG GAGAGCAAAC TTACGCACCA AGGCTCTTCT TCGAGGGCCG TGAACAGCGT CCTACGCTAC AAGATGGGAT CTCGGAGATG GAAGAGTTTT ACATAGACAC AATTGAGAAA GTCCTTGAGA GAAACAAAAT CTCACCTTCG GAGATTGACA TCCTCGTGGT CAACGTCTCA ATGCTCAATT CAACGCCTTC ACTATCTGCA AGAATCATTA AACATTACAA AATGAGAGAG GACATAAAAG TCTTCAACTT GACGGCGATG GGATGTAGCG CGAGTGTTAT CTCTATAGAT ATTGTCAAAA ACATCTTCAA AACATACAAG AACAAGCTTG CTCTTGTCGT GACCTCCGAG TCACTTAGTC CTAACTGGTA CAGCGGAAAC AACAGGTCCA TGATCCTTGC CAACTGCTTG TTCCGCTCCG GTGGCTGCGC TGTTCTCTTG ACGAACAAGC GCAGTCTGAG CAGGAGAGCC ATGTTCAAGC TAAGGTGTTT GGTAAGAACA CACCATGGAG CCAGAGACGA TTCATACAGC GCTTGTGTCC AAAAAGAAGA CGAGCTAGGC CATATCGGTG TCCACTTAGA CAAGACTCTT CCAAAAGCGG CGACTCGTGC TTTCATAGAC AACCTCAAAG TCATCACTCC CAAGATTCTT CCCGTAACCG AGCTCTTAAG GTTTATGTTG TGTCTTCTTC TCAAGAAGCT TCGTAGCAAC CCTAGCAAAG GCTCAACGAA CGTGACTCAG GCAGCTCCAA AGGCAGGGAT TAAAGCAGGG ATTAACTTCA AGACCGGTAT TGACCATTTC TGCATTCACA CTGGAGGTAA AGCGGTTATC GACGCAATCG GTTACAGCCT CGACTTAAAC GAGTACGATC TAGAACCGGC GAGGATGACG CTACACCGGT TTGGGAACAC GTCAGCGAGT AGCTTGTGGT ATGTTTTGGG GTATATGGAG GCAAAGAAGA GGCTGAAGAG AGGAGATAGA GTGTTCATGA TCAGCTTTGG GGCAGGTTTC AAGTGCAATA GTTGCGTTTG GGAAGTTGTG AGAGATCTTA ATGTTGGGGA AGCTCTAGGG AATGTTTGGA ATCATTGCAT TGATCAGTAC CCACCAAAAT CGATTTTGAA TCCATTTTTT GAGAAGTATG GTTGGATTCA TGAAGAAGAA GATCCTGATA CTTTCAAGAT GCCTGAAGGA TTTATGTGAA CATATACAGC TACTTCAAAA CTGCAAATCC ACACAAAGGT GACTATATAG TTTATTTTTA ATTTGGATTC TGAATTGCTA CATTTTACTT CTTTATTTTC TAATTGGATG GGAAAGAAAA TATGAATGAC AAAAGATACT GCGATATATT TTTTTTAATA AATAATTTTT TTGGGTGTAA TAATCTATTT ATTGTATTCC TTTGGTAAAT AATAATACCC CGAAAATTTT AAT 
Length1683
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2688673.. 2690320
Download Sequence
A.thaliana
AGI-codeAT1G07720.1
Description3-ketoacyl-CoA synthase 3
TAIR curator summaryEncodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS3][3-ketoacyl-CoA synthase 3]
Gene coexpression
MR
MR Locus Description
3 Ahg918858 3-ketoacyl-CoA synthase 1
5.47723 Ahg891467 alpha/beta-Hydrolases superfamily protein
5.47723 Ahg485226 HXXXD-type acyl-transferase family protein
8.3666 Ahg493531 HXXXD-type acyl-transferase family protein
10 Ahg938912 pectin methylesterase 61
11.1803 Ahg942164 Protein of unknown function (DUF1677)
12.49 Ahg929488 rapid alkalinization factor 23
14.9332 Ahg488280
19.2873 Ahg923635 ABC-2 type transporter family protein
19.8997 Ahg492392 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression