| Annotation |
|---|
| Description | jgi|Araly1|477999|fgenesh2_kg.3__700__AT3G06810.1 |
| Sequence |
AAATAAAAGT ATCCAAAGGA AAGGTTATGC GACTTACCGT AAATGGAATT ATTTGTATGA ATGCGTGTAT TTGTTTGTGT TAGAGAGCTA TTCTTGTTGA TGAATCTCTG CAACTCTGAG CGAGATAGAG AGTGTGAAGG AACATCATGG GAAGCAGCAC GGGCGATCTG GTGACACGTG TTCAATCAAC TCACCGGTTC GATCACGATG CCTTGTTTCG TTTTGCCGCC GACAACGTCT CCGGTTTTCC GACCAACCCA ACCCAATTTA AAGTCTCACA GTTCGGACAT GGGCAGTCGA ATCCGACGTT TCTGATTGAG GTTGGCTCAG GGAGTTCCTT GAAACGATAC GTTTTGAGGA AGAAGCCTCC TGGGAAGCTC CTTCAATCTG CTCATGCTGT TGATAGAGAG TTTCAGGTAC TTCGGGCTTT AGGTGAACAT ACAGAGGTTC CTGTTCCTAA AGTCTTCTGC TTATGCACTG ACCCTACTGT CATTGGGACT GCTTTTTACA TTATGGAGTT CATGGAAGGA CGTATTTTCA TTGACCCAAA GTTGCCGAAT GTAGCACCTG AAAAGAGAAA TGCGATCTAT CGTGCAACCG CCAAAGCCTT GGCATCTCTT CACTCTGCTG ATGTGGATGC CATTGGTCTT GAGAAATATG GTCGGCGAGG CAATTACTGC CAAAGACAGA TAGATAGGTG GTTCAAACAA TATTTGGCTT CAACAAGTGA AGGTAAACCT GAAAGGAATC CAAAGATGTT TGAGCTTGTT GATTGGTTAC GCAAAAACAT CCCCGGGGAA GATTCTACAG GAGCAACTTC AGGCCTTGTC CATGGAGACT TCCGCATTGA CAATCTCGTG TTTCATCCTT CTGAGGATCG AGTTATTGGA ATAATTGACT GGGAATTGTC CACGCTTGGG AACCAAATGT GTGATGTTGC ATACAGCTGT ATGCATTACA TTGTGAATGT TCAGCTCGAT AAGGAGCATG TTAGTGAAGG TCTTGAAACT ACTGGGCTTC CAGAAGGAAT GCTTTCGATG CCAGAATTTC TCTTAGAATA CTGTTCTGCA TCGGGAAAAC CATGGCCTGC TGCAAACTGG AAGTTCTACG TAGCGTTCTC TTTATTTCGG GCTGCTTCAA TCTACACAGG GGTGTACAAC AGATGGTTAA TGGGGAATGC TTCTGCCGGT GAACGAGCTC GAAATACAGG GGTTCAAGCT AATGAGCTTG TAGAGTCTGC CTTGGGTTAT ATTGCACGTG AAAATGTTCT TCCAGGACAC CCTCCATCTG TTCAAAGAGA CATGTCCTCG TCGTATGAAA GCCTTGTGGA TGGAAGCGGG AGATTCATCC CCAACAGAAA AGTATTGGAG TTAAGGCAGA AGTTGATCAA GTTTATGGAA ACTCACATCT ACCCAATGGA AAAGGAGTTC TCCAAACTTG CCCAATCAGA TATGCGATGG ACCGTTCACC CCGAGGAGGA AAAGTTAAAG GAAATGGCAA AGAGAGAAGG CCTATGGAAC TTATTTGTTC CTGTAGATAG TGCTGCTAGA GCCAGAAGAG AACTGGCGGC TACCGATAAT AAACATAATC TCTCGAGCAG GTCTTTTGAT CAATTGTTTG GTGAGGGCCT CACGAACCTG GAGTATGGTT ACCTTTGTGA GATCATGGGT CGTTCTGTTT GGGCTCCACA GGTGTTTAAC TGTGGTGCAC CAGATACTGG AAACATGGAG GTGATACTGC GGTATGGTAA CAAAGAACAA ATTTCTGAAT GGCTTATTCC GTTGCTCGAG GGAAGAATTC GTTCTGGATT TGCTATGACT GAGCCACAAG TTGCATCGTC TGATGCAACC AATATTGAGT GCTCTATCCG AAGACAAGGT GATTCATACG TCATTAATGG CACAAAATGG TGGACAAGTG GAGCTATGGA TCCCAGGTGC AGAGTCCTTA TTCTCATGGG CAAAACTGAT TTCAACGCCC CAAAACATAA GCAGCAGTCT ATGATATTAG TGGACATGCA GACTCCAGGT ATACGTGTGA AGAGGCCTCT CACAGTGTTT GGTTTTGATG ACGCACCTCA TGGACATGCT GAAATTTCTT TTGAAAATGT GGTTGTCCCG GCAAAGAACA TTCTTCTTGG AGAAGGCCGA GGATTCGAAA TTGCTCAGGG TAGGTTAGGC CCTGGAAGAC TGCACCATTG CATGAGACTA ATAGGTGCAG CAGAGCGTGG AATGGAGCTA ATGGCTCAAA GAGCTCTTAG TAGGAAAACT TTTGGGAAGT TCATTGCGCA GCACGGTTCT TTTGTCTCTG ATCTTGCAAA GTTACGGGTA GAGCTAGAAG GAACCCGATT GTTGGTTCTA GAAGCTGCTG ATCATCTTGA TAAATTTGGA AACAAAAAAG CTCGAGGAAT TCTCGCAATG GCCAAGGTTG CAGCTCCAAA CATGGCATTG AAGGTACTGG ACACAGCAAT ACAAGTTCAT GGAGCAGCCG GTGTATCCTC GGACACAGTT TTAGCACATC TGTGGGCTAC AGCTAGAACA TTGAGGATTG CTGATGGACC TGATGAGGTT CATCTTGGGA CCATTGGCAA GTTAGAACTG CAAAAAGCTT CAAAGCTTTA AAGCGTTTTC GGATCTGCGA ATTCGATTCT CAGAATAAGA TTTACATCAT TAATAAATCT GTTCTTGGTA AATCTGAATA AATTTACTAC AAGATCTTCT TCTGTTTCAT AATGTTAATA C |
| Length | 2741 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2662280.. 2666747 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G06810.1 |
| Description | acyl-CoA dehydrogenase-related |
| TAIR curator summary | Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation. |
| Alias | [IBR3][IBA-RESPONSE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.38516 |
Ahg488386 | U-box domain-containing protein |
| 6.9282 |
Ahg921494 | Galactose oxidase/kelch repeat superfamily protein |
| 7.2111 |
Ahg328336 | RING/U-box superfamily protein |
| 7.34847 |
Ahg470981 | homolog of yeast sucrose nonfermenting 4 |
| 8.66025 |
Ahg944429 | LYR family of Fe/S cluster biogenesis protein |
| 9.16515 |
Ahg940290 | mRNA splicing factor, thioredoxin-like U5 snRNP |
| 13.7477 |
Ahg898366 | DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases |
| 14.1421 |
Ahg488676 | novel cap-binding protein |
| 18.5472 |
Ahg496813 | 2-oxoglutarate dehydrogenase, E1 component |
| 18.5742 |
Ahg485391 | Protein of unknown function (DUF1162) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|