Detail



ID : Ahg472249

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472249|fgenesh2_kg.1__2203__AT1G20190.1
Sequence
TACTACACTA ATTTACACTC ACTTCCCACC TTTATTTAAA CAACTCTCTC TCCTTCACTC GATCATCATC ATCATCATCA TCATAATCTC TTTCTTTGTT CGAAAAATTA TAATCATGTC AAAGTCTCTA GCTGGCTTGG CGGTTTTGGC CACTCTTTTT ATTGCGGTTA ACGCGTTTAA GCCTTCTGGT TTAACTAATG GTCACGCTAC GTTCTATGGA GGAAGTGACG CTTCTGGAAC AATGGGTGGA GCTTGTGGGT ACGGAGATCT TTACTCGGCG GGGTACGGGA CAATGACAGC GGCGTTAAGC ACGGCTCTCT TTAACGACGG AGCTTCTTGC GGCGAATGCT ATAGGATAAC GTGTGATTAC GCGGCGGACT CACGGTGGTG CTTGAAAGGA GCTTCTGTGG TTATTACAGC CACTAACTTT TGCCCACCAA ACTTTGCCTT GCCTAATAAC AACGGTGGTT GGTGCAATCC GCCGCTCAAA CATTTCGATA TGGCACAACC CGCTTGGGAA AAGATCGGAA TTTACAGAGG AGGAATTGTT CCCGTCGTTT TCCAAAGAGT AAGCTGTTAC AAGAAAGGAG GAGTGAGATT CAGAATAAAC GGAAGAGACT ACTTCGAGCT AGTCAACATT CAAAATGTAG GAGGAGCAGG TTCGATTAAA TCTGTCTCCA TCAAAGGATC AAAGACTGGT TGGTTAGCCA TGTCTCGTAA TTGGGGAGCT AATTGGCAAT CAAATGCTTA TCTCGATGGT CAATCTCTCT CTTTCTCCAT TACCACTACC GATGGTGCTA CAAGAGTCTT CCTCAATGTT GTTCCTTCTT CCTGGTCTTT TGGACAGATT TATTCTTCCA GCGTTCAGTT TTAAGTTTTT TTTTTTTTTT TTTGTGGGTT CTGTCTGAAA TATTATTGGC AGTGGTCGCG CTCTGAGTCT GTTTCTTAAC TCCCTGAGCG ACCCGCCTCT TCTGGTTTGA TGGGTCTGTT AATACAGAAG ACCCGATTTG ATTTGAGGAA AATATGATTA TATGAAATGT ATTGTATATT TGTATTTGAA TGTTTCAAAC TCGAAAAGAT TCTGTAGCAA AAGGAGTTTA ACACATTTGT ACTTGGTT 
Length1118
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8217610.. 8219240
Download Sequence
A.thaliana
AGI-codeAT1G20190.1
Descriptionexpansin 11
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP11][ATEXPA11][ATHEXP ALPHA 1.14][EXP11][EXPA11][expansin 11][EXPANSIN 11]
Gene coexpression
MR
MR Locus Description
14 Ahg475479 NDH-dependent cyclic electron flow 1
16.4012 Ahg477371 carbonic anhydrase 1
19.3391 Ahg484893 xyloglucan endo-transglycosylase-related 8
21.6333 Ahg490753 FK506-binding protein 16-2
23.9374 Ahg473938 mitochondrial lipoamide dehydrogenase 1
26.1151 Ahg481640 Cysteine proteinases superfamily protein
32.5883 Ahg925310 ammonium transporter 1;2
33.4813 Ahg492364 Pectin lyase-like superfamily protein
34.0734 Ahg932045 SAUR-like auxin-responsive protein family
36.7423 Ahg494136 Ribulose bisphosphate carboxylase (small chain) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression