Detail



ID : Ahg475479

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475479|fgenesh2_kg.2__609__AT1G64770.1
Sequence
GATTAACTTT CGTTGGTGGC TCAGCCCACT ACAAACTTCA TTTGTCTTAT CTTTTTCTTC TCCATACTCT CCATCAATGG CTTCTCTTAT CTCTTTCTCT TTGCTCCCAA AACCAAAAGC CGTAAGAAGT TCAATTTCAG CTCCTCAGAC ACAGACAATA ATTGAGAGGC TTGAAGATAA ATTCGGACGA AAAGGCATAA AATTCTCGGA ATCAAACAAC ATTCCTATGG TAGAGCTTAA GGTGAGAAAT GGAAGTTCAT TAAAACTGAG TCTATCAGAT GCTCATGTGG TTTCATATAA GCCAAAGGTA TATTGGAAAG ACGAGGGATT CGAGGAAGTC CTTTACACAG TTGATGGTGA TGAGAGCAGA GGTGGGGTTG GTGTTGTTAT CGTAAACGGG GAAGAACCTA ATGGACCAAA AGGAGTGTCT TCAGTAATCT CAGGATATGA TTGGAGTGTC AAGGATACTG ATTCAGACGC CATTGATGCT CTTCAGATCG AACTTAGCTG TACGGCCGGG GTTCTCGACA TAACGTATAT CGTCTCTCTC TATCCAGTAA GCATGGCTAC AGCTCTGGTG GTTAAGAACA ATGGTCGCAA ACCAGTTACC CTTAAACCGG GGATTATGAG TTACTTGAGG TTCAAGAAAC GGAGTGGGGC AGGAATTCAA GGACTAAAGG GATGCTCTTA TTGCCCCAAC CCGCCTTTGT CATCGCCTTT TGAGCTCTTG TCTCCTTCCG AGGCAATGAA GGCGGACTCT TCCGGGTGGT TTGGGTCGGA CGAAGGGGAA AAGCCGGGGA TTTGGGCGGT AGAAGATTCT GTTATTACAC TTCTTGAGAA AAAGATGAGT AGAATATATG GTGCTCCTCC GGCTGAGAGA TTAAAGGCAG TCTATAACAC TCCACCTTCA AAATTTGAAA CTATAGATCA GGGAAGAGGA TTGTTTTTCA GGATGATAAG GATAGGGTTC GAAGAGATGT ATGTGGGATC CCCAGGATCG ATGTGGGACA AGTATGGGAA GCAACATTAC TTCGTGTGCA CAGGTCCAAC GTCAATGCTC GTTCCTGTCG ATGTGGCCTC CGGAGAGACA TGGAGAGGAG CAATGGTAAT CGAGCATGAT AATTTGTAAA TTTCATTAAC TATAGTTCTG TATTCTTCAT TTTTTTCTCT ATTTTTGTTG CCATTTTTTC TTCTATA 
Length1197
Protein Sequence
Protein Residue
Map Locationscaffold_2: 6939768.. 6941718
Download Sequence
A.thaliana
AGI-codeAT1G64770.3
DescriptionNDH-dependent cyclic electron flow 1
TAIR curator summaryencodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.
Alias[NDF2][NDH45][PnsB2][NDH-dependent cyclic electron flow 1][NAD(P)H DEHYDROGENASE SUBUNIT 45][Photosynthetic NDH subcomplex B 2]
Gene coexpression
MR
MR Locus Description
10.1489 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
13.4907 Ahg925310 ammonium transporter 1;2
14 Ahg472249 expansin 11
14.0712 Ahg316308 Protein of unknown function (DUF1295)
15.8745 Ahg494136 Ribulose bisphosphate carboxylase (small chain) family protein
16 Ahg938526 sedoheptulose-bisphosphatase
18.7617 Ahg493621 glutamine synthetase 2
20.9762 Ahg475922 hydroxypyruvate reductase
23.3238 Ahg492575 PGR5-LIKE A
24.98 Ahg943235 ATPase, F1 complex, gamma subunit protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression