Detail



ID : Ahg472418

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472418|fgenesh2_kg.1__2372__AT1G21790.1
Sequence
ATCGACCGAC ACGTGTCCGT TGCGTCCCAA AGAGGCTCTT TTAAGCGTAA AAACGTGAAG GCATTTGTAT CGTCTCTTCC GCCAAAATTG GAAATGGATA TCGGAGCTTG AGCTAAGAAC AATCCAATTT AGGGTTATCT TTGCCGGATT CTCAAGCAAT CTCCGAGAGA AAGAGGAGGG GTTTCGATGG CGAGGAACGG GATTGGGAAC ACGGGAGTGA AGAAGAATGG GGCTGGTGAG TTTTTCCTGG CGACGCTGCT TCTATGGCTG GGCTCCGTCG TGTTTGAGAT TGCTTTCAAT CTCCGGACGG AGCTTCTATG GGTGATTTGC GGTGGATGTT TCTTTCAATT GATGAATTGG GTGGTTCGTT CTTGGATTTC TCGTGACCCT CTCTTTGTTA ATACCTCTGT CTCGCTATTG CACTCAATCA TCACCTCCGC ATCAGTGGTT TTCATTCTGC TCAATCAATG CTTAGCCAAA GGTTTAGACG AGATGTTCGA TCATTCTGAG TTGGTTGGTG GTACTTGGAA ATGGGCATAT CCAGCTTTGT GTTTCTCATG CGGATACTTT GCATATGACC AGTGGGATAT GCTTCAGTAC CGATTATACA GCGGGTTAAT ACCTTCCATT CTGGTTCACC ATCTAGTCCT CCTTGTTTGC TTCACATTGG CTCTATACCG AAATGTAACC ATCAACTACC TGATTCTTAC TCTCATTTGT GAGATGCATT CGATCTTTCT ACACGTGAGG AAGCTAAGGA GAATGGCGGG AATCCGAGAC AGCAACACAG CATTGGTGAA ACTGGAGTGG GTGCTAAACT GGACAGCCTT TGTGTTTGCG AGGTGCATTC CTCACATTCT CATCACTATC AAGCTGATCA AAGACGCACA CAAGTTTGGG AAAGGTGTGG AGTTACCGCT CGCTTTGTCT GGTATGGCGG GAATGAACAT CCTCAATGTC GGCCTCGGAT TGGATCTGTT TCATGCTTTC AGAAGAGAGA GAAGCAACAG AAGAAATCAA GAGAACAACA ACCATCACGA CCATGGAGAA TAATAGCTAA TTTAGAAACC ATCCCATTAC CGATGGCTAT GGTTTGTTGT ATGACTACTA CCCACTCATC TCTTGTTTAT CTAATAGCTT TCGGATTTGT ATATGTACTC TATAGGAAAA CTATATGTAA ATGTTATTTG TTGATGATTA CAG 
Length1203
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8995796.. 8997644
Download Sequence
A.thaliana
AGI-codeAT1G21790.1
DescriptionTRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.9282 Ahg903443 Low temperature and salt responsive protein family
8.06226 Ahg941255
9.38083 Ahg949787 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
14.4914 Ahg496967 Dehydrin family protein
14.5602 Ahg946646 phytochrome D
15 Ahg922379 Glycosyl hydrolase superfamily protein
15.1987 Ahg945603 HVA22 homologue D
17.4642 Ahg486909 BRCA2-like B
17.7482 Ahg887646
18.4662 Ahg480962 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression