Detail



ID : Ahg475950

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475950|fgenesh2_kg.2__1080__AT1G68310.1
Sequence
AAAATGGTAA CTGGGTTGAT TAACGAGAAC CCAATCATTT ACCCGAAGAA AGAGAGGCGT CTTCGAACTG ATTCAAGCAC TACCGATGAG TTTACACCAG AACCAATTGA TCAACTTGAG ATTTTTGATA TCCTTAATTT TGGGAATTGC AATCCTTTTG TTGTAGATAT CAAAGATCCA GAGCATCCTA ATACTCTGGA AGATCTCAGA GTAGTTACGG AAGACTCAGT TGAAGTGGAT GATGAGAACA GTTATGTTAG GGTTACGTTC ACTCCAACTG TGGAACATTG TAGCATGGCA ACCGTTATCG GTCTTTGTGT CCGCGTGAAA CTTCTGCGAA GCCTTCCTTC TCGATACAAG ATTGATATAC GGGTAGCGCC TGGTTCTCAT GCAACAGAGG ATGCATTGAA TAAACAACTA AACGATAAAG AACGTGTGGC GGCTGCACTA GAGAATCCAA ACCTTGTGGA GATGGTCGAT GAATGCCTGC CATCAGAAGA GTGAATTGTT TTTATTTTCT TGTGAGCAAG TAATTTACAC AAGCCTGGTG GTCTCAGTTT ACACTAACAA TACATGTCTC TGTTTTATTT GCAAAGATTT TGATCCATCA CATCGACTAG GACTGCATTG TAATTCTTAC TCTGATTTCA AGTTTGTTCT CAATCATTTC AATAAAGTCT CAATAACAAT TTCTTTTTAC TAAAAGTTGA AGTGTCATTT CGATTTC 
Length727
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12206673.. 12208274
Download Sequence
A.thaliana
AGI-codeAT1G68310.1
DescriptionProtein of unknown function (DUF59)
TAIR curator summaryEncodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized.
Alias[AE7][AS1/2 ENHANCER7]
Gene coexpression
MR
MR Locus Description
17.1464 Ahg928970 cystatin B
27.6043 Ahg486329 citrate synthase 2
29.8998 Ahg480060 MATE efflux family protein
31.3847 Ahg933740 RAP
37.6298 Ahg471081 ATP phosphoribosyl transferase 2
38.4187 Ahg923649 Cation efflux family protein
47.0213 Ahg492821 JUMONJI 14
58.3952 Ahg472301 high mobility group B2
59.127 Ahg481556 Putative methyltransferase family protein
63.9218 Ahg496593 Inositol monophosphatase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression