Detail



ID : Ahg476977

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476977|fgenesh2_kg.2__2107__AT1G78100.1
Sequence
AAACTCTCTC TACACAGCTC ATAACACAAA GTGAGAGAAC TCTCTAAACA GTCCCGAAGG TTTCAAAAGG GTATTTTAGT AAAACCATAG AAAAAGAGAA TCATGGACGC TTTTGATGCG ATTCCAGATC CTGTGGTCAT CGACATTTTG AACAAAGTCG GTGACGTCAA AACGTTAATA CGATGCCGTT CCGTTTCCAA ACGATTCAAC TCGTTAGCCA CTCAGTCCGA CTCACTCCTT CTTCAACTCG ATCAGATCCT CGGAGCCACC GAATCTGACT CCGAGATCGA TTCTCCGATC GCTAGCTTCT TCCGATCTCT GTTCAAATCC ATTTACGGTC TCCTCCCTAG CTTCTCCAAA CCAGCTAAAA CTGACGAAAT CTTAACCCGA TCCCCGAAAA CTCCGGCTCA GATTCTCGCC GGATTTGAAC GGATCCGGAA TCTGGAGGTG GAGTTATACG GCGGAGATGT CAAGCTCGAG AAAGGCGCCG CCGTTAAGTG GAAGGCTGAG TTCGGAAAAA CTCTCAAGAG CTGCGTCATC GTTGCTTTCC GTTCCGCGAC GGTTAATACT TCAGCAGCTA CGGAATCTGC CGCCGTCGTT GACGGTGGCG TGGAGTCTGA TTCGGAGTTC GTTTGTGGAT TGAAGACGCG CGTGGTGTGG ACGATCAGCG CGTTGATGGC GGCTTCGACG CGTCATTACT TGATGAGAGA TTTGGTGAAA GATCACAAGG AGATGGAGAA ATTGATTGTG CGTGACAGAG AAGGAGAAGG TACGGTGGTG ATGGACGCGG CGGGGATGAA AGAATACAGA GAGACGGAGG CGCGTGGAGA TGATAAAACA TTAGAGCGCG TGGGTGAACG CACGGTGGTT CCTAGCGTCA GGATGAGTAT GAGACACGCG CCGTCGCTGA TGCTGAAGAG CGGGATTTGT CTTGAAGCCG CGACGCTGGT TGTCGTAAGG CCGACTGGTG TGGCTTCCGA TGATAACGAT GTTGAGCTGG TGACTGAGGC GTTTGCCGGA GATGGCGGTG ATTGTATGTA CGGAGAAGCC GTTACGGCGT TGCTCAAGCG TAGGAGAAAT GTGTTAGAGA TGAATTCTTT CTAAGGCCTA ATGGGCTTTT TTTTATATAC ATACGCATCG TACAAAGCCG ACCGTACTAT TGGCGTACGA CTTTTGGGTC AAATGACATC GAATCCGAAT TATTCCTCTA ATATCATATG ATTACCACAT TAAATGCGTT GCAGCAGCTA ATATAATATA TAGATATGAT TCG 
Length1273
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17009643.. 17010950
Download Sequence
A.thaliana
AGI-codeAT1G78100.1
DescriptionF-box family protein
TAIR curator summary
Alias[AUF1][auxin up-regulated f-box protein 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg929488 rapid alkalinization factor 23
9.48683 Ahg928150 regulatory particle triple-A ATPase 5A
9.53939 Ahg926960 GAST1 protein homolog 1
13.9284 Ahg489859 Sucrose-phosphate synthase family protein
19.3907 Ahg355122 oligopeptide transporter
20.567 Ahg914489 SPA1-related 4
27.1477 Ahg480112
28.7228 Ahg943760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
31.6544 Ahg926134 3-ketoacyl-CoA synthase 6
37.8946 Ahg491847
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression