Detail



ID : Ahg496494

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496494|fgenesh2_kg.8__2310__AT5G63120.2
Sequence
AGGGTTACTA ATTTTGGAAT TTTACTGTCC AAAACGAATC ATAAAATATC TAGCTTTTTG TTCCTTTTGC GGCTTTTTCG ACGTCTTCCT TGCACTATCT TCCTTCTATA GCATCAATTC GACTCTAAGG TTACGTAGTA GAATTTAAGC GAGAGACAAG ATCAAAAAAG TTACGATGAG CTCGTATGAT CGTAGATTTA CTGATCCAAA TTCGTATCGC CAACGCTCTG GCGCCCCAGT TGGTTCGTCT CAGCCGATGG ATCCTTCCGC TGCACCATAC AACCCACGGT ACAGTGGTGG TGGTGGTGGG TATGGACCGT CTCCTGTAAT GGCCGGTGAC AATTCCGGAT ATAATCGGTA CCCATCTTTC CAGCCACCTA CTGGTGGTTT CTCTGTTGGT CGTGGCGGTG GAAGAGGTGG ATACGGTCAA TACGGGGAGA GAAGCGGCGG AGGGAATTGG GGAGGACGTG GTGGATCGAG TAAAAGAGAG CTAGATAGTG TTTCTCTTCC GAAGCAGAAT TTTGGGAATC TTGTACATTT CGAGAAGAAT TTCTACGTGG AGAGTCCCTC TGTGCAGGCT ATGACGGAGC AGGATGTTGC TATGTACAGA ACCGAGAGGG ATATATCCGT TGAAGGTCGT GATGTTCCTA AGCCGGTTAA GTTGTTCCAA GATGCTAATT TTCCAGATAA TATCCTCGAA GCAATTGCTA AGTTGGGATT TACTGAGCCA ACACCTATAC AAGCTCAGGG ATGGCCGATG GCGTTGAAGG GTAGGGATTT GATTGGTATT GCTGAGACTG GCTCTGGTAA GACATTGGCT TACTTGTTAC CAGCGTTGGT TCACGTTAGT GCGCAACCTC GATTAGGTCA AGATGATGGC CCCATCGTGT TAATTCTAGC GCCTACGAGA GAACTAGCTG TTCAGATTCA AGAGGAATCA AGGAAATTCG GGCTTCGATC TGGTGTTAGA AGTACTTGTA TCTATGGTGG TGCTCCTAAA GGACCTCAGA TTCGCGATCT TAGAAGAGGT GTTGAGATTG TAATTGCTAC ACCTGGTCGT TTGATCGATA TGTTGGAGTG TCAACACACT AATCTGAAGA GAGTGACTTA CCTTGTACTG GATGAGGCTG ACAGAATGTT AGACATGGGA TTTGAACCCC AAATTAGAAA GATTGTATCT CAGATCCGAC CTGATAGACA AACACTTCTT TGGAGTGCAA CATGGCCACG GGAGGTTGAA TCTCTTGCCA GGCAGTTTCT ACGAGATCCA TATAAGGCCA TTATTGGATC AACAGATCTA AAAGCTAACC AGTCTATTAA CCAAGTAATC GAGATTGTAC CGACGCCAGA GAAATACAAC AGGCTCCTTA CACTGCTTAA GCAGTTAATG GATGGGAGTA AAATCCTAAT ATTTGTGGAG ACAAAGAGAG GGTGTGATCA AGTGACTAGA CAATTGAGAA TGGACGGATG GCCAGCTCTT GCCATACATG GTGACAAGAC CCAATCGGAA AGGGACCGAG TCTTGGCAGA ATTTAAGAGT GGACGAAGCC CGATAATGAC TGCCACTGAT GTAGCAGCAA GGGGACTTGA TGTTAAGGAC ATAAAATGTG TGGTTAATTA TGATTTCCCA AATACCTTGG AGGATTACAT CCATAGGATT GGTCGAACTG GGCGTGCAGG AGCTAAAGGA ATGGCCTTTA CATTCTTCAC ACATGACAAT GCCAAGTTTG CAAGAGAGCT TATCAAGATC CTTCAAGAAG CTGGTCAAGT TGTACCTCCT ACTCTCTCCG CACTAGTCCG GTCATCTGGT TCGGGTTATG GAGGTTCTGG TGGGGGAAGA AACTTCCGGC CAAGAGGAGG AGGACGTGGT GGTGGGTTTG GAGATAAACG GTCAAGATCG ACTTCAAACT TTGTACCTCA CGGTGGAAAG AGGACTTGGT AGAGATAAGA GATAATCTCA TCATTTTGAT TCTCTGAGAA AAGCTTGGAT TATGATGATG ATGATCAGCG TTTAGTTTCG AGTTGAAGTT CTCTTTCGTA GAGAACAAAC TTATACTATT TAACTATTTA CCTGATTTCG CTTCTTCGTC TTCGTCTTCT TCTTGATTCT ATCAACTAAA TACACTT 
Length2127
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19601047.. 19604560
Download Sequence
A.thaliana
AGI-codeAT5G63120.2
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.63325 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
9.27362 Ahg477786 ARM repeat superfamily protein
10.8167 Ahg919141 Major facilitator superfamily protein
12.2474 Ahg356828 cold regulated gene 27
12.9615 Ahg492278 arginine/serine-rich splicing factor 35
14.5945 Ahg895753 HSP20-like chaperones superfamily protein
14.8324 Ahg916949 RNA-binding (RRM/RBD/RNP motifs) family protein
16.3707 Ahg496297 CCT motif -containing response regulator protein
16.9706 Ahg941635 sucrose synthase 1
17.3781 Ahg473612 Formyl transferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression