| Annotation |
|---|
| Description | jgi|Araly1|482018|fgenesh2_kg.4__1078__AT2G30950.1 |
| Sequence |
TCTTTCTCTC CATCTTCCAT ATTTGCAGAG CTCGAGATTC TCCTTCCTTA TACAACTCTC ATCTGTAATC GATACAGATG GCAGCTTCAT CAGCTTGTCT TGTGGGAAAT GGATTGTCAG TGAACACAAC GACCAAACAG AGGTTAAGTA AAAACTTTTC CAGCAGACAG ACAAACTTTT CTTCAGTGAT TAGGACATCT AAGGTTAATG TAGTGAAGGC TTCTTTGGAT GTGAAGAAGA AACATGAAGG AAGAAGAGAT TTTCTTAAAA TCTTGTTAGG AAATGCCGGG GTCGGTTTGG TTGCAAGTGG GAAAGCAAAT TCAGAGGAAC AAGCGGTTTC GTCGTCTAGG ATGTCGTATT CTAGGTTTCT AGAGTATTTG GATAAGGATA GGGTGAATAA AGTTGATTTG TATGAGAATG GGACTATAGC TATTGTGGAA GCTGTTTCTC CTGAGTTGGG TAACCGGGTT GAGCGTGTTC GTGTTCAGCT ACCGGGATTA AGTCAGGAGC TTCTCCAGAA GCTTAGGGCC AAGAATATTG ATTTTGCAGC ACATAATGCT CAGGAAGACC AAGGTTCTGT GTTATTCAAC TTGATTGGTA ATCTTGCTTT CCCGTTGCTT TTGATTGGTG GTTTGTTCCT TCTTTCGAGA CGCTCTGGTG GTGGAATGGG TGGACCTGGT GGTCCTGGTA ACCCACTTCA GTTTGGTCAG TCCAAAGCAA AGTTCCAAAT GGAACCTAAC ACTGGTGTAA CATTTGATGA TGTTGCTGGA GTTGATGAAG CAAAGCAGGA TTTCATGGAA GTGGTGGAGT TTCTGAAGAA ACCCGAGAGA TTCACTGCGG TTGGTGCCAA GATTCCGAAA GGTGTTCTCC TTATTGGTCC CCCTGGTACT GGGAAAACCC TTTTGGCAAA AGCCATTGCT GGTGAAGCTG GTGTGCCTTT CTTCTCCATC TCTGGTTCTG AGTTTGTTGA GATGTTTGTC GGTGTTGGTG CCTCAAGAGT CCGTGATCTT TTCAAGAAAG CCAAGGAGAA CGCTCCTTGC ATTGTCTTTG TAGATGAAAT AGATGCTGTT GGTAGGCAAA GAGGAACCGG AATTGGTGGA GGTAATGATG AAAGAGAACA GACCCTCAAT CAGCTCCTAA CTGAGATGGA TGGTTTTGAA GGTAACACTG GTGTTATCGT AGTTGCTGCA ACCAATAGAG CAGACATTCT TGATTCTGCT TTGTTGAGGC CAGGACGGTT TGACCGGCAG GTAAGTGTTG ACGTTCCAGA CGTTAAGGGG AGAACAGATA TTCTCAAGGT TCATGCCGGT AATAAGAAGT TCGACAATGA TGTCTCACTT GAAATAATAG CAATGAGAAC ACCCGGATTT AGCGGAGCAG ATCTCGCTAA CCTCTTGAAT GAAGCTGCTA TATTGGCCGG AAGGCGAGCG CGGACGTCGA TATCATCTAA AGAGATTGAT GACTCCATTG ATAGAATAGT TGCTGGCATG GAAGGAACAG TGATGACCGA CGGGAAGAGC AAAAGCTTGG TTGCTTACCA TGAAGTTGGT CATGCAGTGT GTGGAACATT GACTCCAGGA CATGATGCTG TGCAAAAGGT AACGTTGATA CCAAGAGGCC AAGCAAGAGG TCTGACTTGG TTCATTCCGT CAGATGACCC GACACTCATC TCCAAGCAAC AACTCTTTGC AAGAATTGTT GGTGGACTCG GTGGTCGAGC CGCTGAAGAA ATCATCTTTG GTGAGCCTGA GGTGACTACT GGCGCAGTTG GTGACTTGCA ACAGATCACC GGTTTGGCTA GACAGATGGT AACAACATTT GGAATGTCTG ATATTGGACC ATGGTCGTTG ATGGATTCAT CAGCACAAAG TGATGTCATC ATGAGAATGA TGGCAAGAAA CTCCATGTCT GAGAAGCTTG CAGAAGACAT TGATTCTGCA GTGAAGAAAC TATCCGACAG TGCATATGAG ATAGCTCTAA GCCACATAAG GAACAATCGT GAAGCCATGG ATAAGCTCGT TGAAGTGCTT CTCGAGAAAG AAACAATTGG CGGTGACGAA TTCAGGGCAA TTCTTTCTGA GTTTACTGAA ATCCCACCAG AAAATCGGGT TCCTTCTTCA ACAACATCAA CTCCAGCATC AGCACCAACA CCAGCTTCCG TCTAAGTAAG AAATTTGTAT ACTTGTGATA CTTATAATTT TTCTGTAAAT TTATCTGTCA AACTTACACT CTAGAAATGT GATACTATCT CAAAATTTAG TAGCAAGTAA ATGTTAAAA |
| Length | 2279 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13838690.. 13841964 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30950.1 |
| Description | FtsH extracellular protease family |
| TAIR curator summary | Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity. |
| Alias | [FTSH2][VAR2][VARIEGATED 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg494803 | FtsH extracellular protease family |
| 5.09902 |
Ahg940830 | elongation factor family protein |
| 7.34847 |
Ahg476539 | signal peptide peptidase |
| 8.12404 |
Ahg493490 | phytoene desaturase 3 |
| 10.6771 |
Ahg492762 | PPDK regulatory protein |
| 13.0384 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 13.1909 |
Ahg475077 | Translation elongation factor EFG/EF2 protein |
| 13.4164 |
Ahg479910 | Protein kinase superfamily protein |
| 14.6969 |
Ahg943720 | Major facilitator superfamily protein |
| 14.6969 |
Ahg487193 | glutamate synthase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|