Detail



ID : Ahg479040

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479040|fgenesh2_kg.3__1741__AT3G15850.1
Sequence
TAAGGGTTTA AGTCTCTTCT CTTGGCTTCT CTTAGCCATC ACATCGATAA TGGCTTCTCT TTTAACAAAA CCCAAAGCCC TTTTCCTCTG TTCACCATCG TTATCTCCAC GAACTTTGAA CACATCAACA CCGTCATTGA ATTTCACCAG AATTTCATTC ACCCACCACC AAAAGCTTGC TCCTTTCAAG CCTCCAAGTC TCGTTGTTGC ATTCTCTGAG AAGGGTTTGA AGAGAGATGT CACCACAGCT GCTGCTGCGA CGGAGGGAGA TTACAGAAGG ATAATGCTAT CGGATGTGTT GGTGAAGAAG AAGGAAAAAG TAGTTTGGTG GGAGAGGGAA TGGAAAGCGA TGGATTTTGG AGCTGTTGCT GTGGTTTTGT CTATGCATTT GCTTAGTCTT TTGGCTCCGT TTCAGTTCAA TTGGAGAGCT GTTTCGGTTG CTTTTGGGCT TTATATCGTT ACAGGTCTTT TGGGTATTAC TCTGTCTTTC CATAGGAATC TTTCTCATAA GGCTTTCAAG CTTCCCAAAT GGCTTGAGTA CTTGTTTGCT TATTGTGGAG CTCAAGCTCT TCAGGGAAAC CCAATTGATT GGGTGAGTAC ACATAGGTAT CATCATCAGT TTTGTGATTC AGACAGAGAC CCTCATAGTC CACTTGATGG GTTTTGGTTC AGTCATATGA ATTGGATGTT TGATACCAAT ACAATCACCC AAAGGTGTGG AGAGCCTAAT AATGTTGGGG ATTTGGAGAA GCAACCATTC TATCAATTCC TTCGAACCAC CTACATTTTG CATCCGGTGG CTCTAGCGGT TGCTCTATAC GCAATGGGTG GCTTCCCATT CATCGTTTGG GGAATGGGTG TAAGAATAGT ATGGGTGTAT CATATAACTT GGCTAGTGAA CTCAGCTTGT CATGTATGGG GAAAACAAGC ATGGAACACA GGCGATTTGT CTAAGAACAA CTGGTGGGTA GCAGCTCTAG CATTCGGGGA AGGATGGCAC AACAATCATC ATGCTTTTGA GTTCTCAGCT CGACACGGTT TAGAATGGTG GCAACTTGAT ATGACTTGGT ACGTCGTTAG GTTTCTTCAA GCCATCGGTT TAGCAACCGA TGTCAAGCTC CCATCGGAAG CTCAGAAACA AAGAATGGCA TTGACCAGCG ACTGATCTTG AAAAAACTGT CGGTACGATT GAAGCTATGA AGGTTTTAAA AATTTTTTGT GTTTACATAA AGGTATATAT CTGTGCAAGA GATTGTATGT GACAAACTGA TTATGAATTT TAAATATCTA TAATTACATT CAATACAAAA GGAA 
Length1314
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6302594.. 6304762
Download Sequence
A.thaliana
AGI-codeAT3G15850.1
Descriptionfatty acid desaturase 5
TAIR curator summaryChloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.
Alias[ADS3][AtADS3][FAD5][FADB][JB67][fatty acid desaturase 5][FATTY ACID DESATURASE B]
Gene coexpression
MR
MR Locus Description
13.6382 Ahg492365 31-kDa RNA binding protein
19.3907 Ahg945589 acyl carrier protein 4
20.7364 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
24.8596 Ahg484431 glyceraldehyde 3-phosphate dehydrogenase A subunit
30.0333 Ahg473855 photosystem I light harvesting complex gene 5
32.078 Ahg939449 Ribosomal protein L1p/L10e family
32.8634 Ahg482332 Ribosomal protein S5 family protein
33.3167 Ahg476761 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
34.5977 Ahg488319 carbonic anhydrase 2
37.3898 Ahg951910 photosystem II subunit T
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression