Detail



ID : Ahg479952

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479952|fgenesh2_kg.3__2653__AT3G24430.1
Sequence
ATGCCGCTTC TCCATCCTCA GTCGTTGAGG CATGCTTGTT TCGAGTTTCA GACTCAAAGA AGCAATTCTA CAAAAAGATT GCTTCTTTCT CACAAGTTTC TCCAATCTCA ATCTTCCATT ATCTCAATCT CCAGGACAAG AATCCTCAAA CGGGTCTCTC AGAAACTCTC TATAGCTAAA GCTGCTTCAG CTCAAGCTAG TAGTAGTGTT GGTGAGAGTG TTGACAAAAC ATCAGAAAAA GATGTGTTGA AGGCGTTGTC TCAGATTATT GATCCTGATT TTGGGACAGA TATTGTTTCT TGTGGTTTTG TGAAAGATTT GGGGATTGAT GAAGCTTTGG GTGAGGTTTC GTTCCGGTTG GAGCTGACAA CACCAGCATG TCCTGTCAAG GACATGTTTG AGAACAAGGC AAATGAGGTA GTTGCAGCGC TTCCTTGGGT GAAGAAGGTC AATGTGACAA TGTCAGCACA ACCAGCCAAA CCAATATTTG CAGGACAGCT TCCCTTTGGA TTATCAAGAA TTTCGAACAT TATCGCTGTT TCTAGTTGCA AGGGTGGTGT TGGAAAATCA ACAGTAGCTG TAAATCTTGC TTATACATTA GCTGGTATGG GTGCTAGAGT TGGTATCTTT GATGCTGATG TCTATGGTCC AAGTCTACCA ACCATGGTGA ATCCTGAGAG CCGTATATTG GAAATGAACC CGGAGAAGAA GACCATCATT CCAACAGAAT ACATGGGGGT CAAACTAGTC TCATTTGGAT TTGCAGGACA AGGACGTGCT ATAATGAGAG GTCCTATGGT GTCTGGTGTT ATAAACCAAC TCCTTACAAC AACTGAATGG GGAGAGTTGG ATTATCTTGT TATCGACATG CCTCCTGGAA CTGGTGATAT TCAACTGACC TTATGCCAGG TTGCGCCATT GACAGCAGCG GTAATTGTCA CCACCCCACA AAAGTTGGCG TTTATTGATG TTGCGAAAGG TGTACGAATG TTCTCAAAAC TGAAGGTGCC TTGTGTTGCT GTTGTGGAGA ATATGTGCCA CTTTGACGCT GATGGGAAAC GTTATTACCC TTTTGGGAAA GGTTCAGGTT CTGAGGTTGT CAAGCAATTC GGCATACCTC ACCTCTTTGA CCTCCCCATT AGACCGACGT TATCTGCTTC GGGGGATAGC GGAACTCCTG AAGTGGTGTC GGACCCTCTA AGTGACGTTG CCAGAACGTT CCAGGATCTT GGTGTATGTG TAGTGCAACA ATGCGCCAAG ATACGTCAGC AAGTATCGAC GGCTGTGACA TACGACAAAT ATCTCAAGGC AATTAGAGTA AAGGTACCAA ACTCAGACGA AGAATTCTTA CTGCACCCTG CAACCGTCAG AAGAAATGAT CGATCTGCAC AAAGCGTGGA CGAGTGGACT GGGGAGCAAA AGGTTCTATA TGGGGATGTA GCAGAAGATA TCGAACCTGA GGACATACGA CCAATGGGAA ACTACGCTGT CTCGATAACC TGGCCAGACG GGTTTAGCCA GATTGCTCCA TATGACCAGT TGGAAGAAAT TGAACGGCTA GTAGATGTTC CTCCATTGTC TCCGGTCGAA GTCTGA 
Length1596
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11025729.. 11029044
Download Sequence
A.thaliana
AGI-codeAT3G24430.1
DescriptionATP binding
TAIR curator summaryencodes a MRP-like protein with a nucleotide-binding domain.
Alias[HCF101][HIGH-CHLOROPHYLL-FLUORESCENCE 101]
Gene coexpression
MR
MR Locus Description
7.81025 Ahg940830 elongation factor family protein
11.1355 Ahg330331
18.868 Ahg946135 RAB GTPase homolog E1B
22.6274 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
22.9783 Ahg475075
23.6854 Ahg471025 chloroplast RNA binding
28.3019 Ahg492357 Protein kinase superfamily protein
34.7563 Ahg482188 Lycopene beta/epsilon cyclase protein
35.0999 Ahg315784 Zincin-like metalloproteases family protein
37.229 Ahg471925 Translation initiation factor 2, small GTP-binding protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression