Detail


ID : Ahg489169

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489169|fgenesh2_kg.6__2303__AT5G23120.1
Sequence
ACATCAATGG CGTCTCTGCA ACTCTGCGAC GGTTATCTTC TCTTCAAGCC CTCTGTTTCT CCTCAACGCA TCTCTCACCG CCTCATCCCT AAAGCCTCCG CTTCACCGTC GTCTTCTTCT TCCTCCTTAT CTTTCAGTCG GCGGGAGCTT CTATACCAAT CGGCGGCTGT ATCACTCTCC ATTGTTGGAC CAGTAAAAGA AGCGAAAGCT GATGAACAGT TATCAGAATG GGAAAGAGTG TTTCTCCCAA TCGATCCCGG TGTTGTTCTT CTCGACATTG CTTTCGTCCC CGACGAACCT AGCCGCGGGT TTTTACTGGG AACGAGACAG ACTCTATTAG AGACTAAAGA CGGTGGAAAC ACTTGGAATC CACGCTCGAT TCCTTCAGCT GAAGAGGAAG ATTTCAATTA TAGATTCAAT TCGATTAGCT TTAAAGGCAA ACAAGGATGG ATTATTGGCA AGCCTGCAAT TTTGTTGTAC ACTGCTGATG CTGGAGAGAA TTGGGATCGG ATTCCTCTAA GTTCTCAGCT TCCTGGAGAT ATGGTGTTTA TAAAAGCGAC AGGAGATAAG AGCGCAGAGA TGGTTACTGA TGAAGGTGCT ATTTATGTTA CTTCAAACAA GGGATATAAC TGGAAAGCTG CTATTCAGGA AACTGTTTCA GCTACCTTGA ACAGAACGGT ATCTAGTGGA ATCAGTGGTG CTAGTTACTA CACGGGAACC TTCAGTGCCG TTAATCGTTC ACCTGACGGA AGATATGTCG CTGTTTCCAG CCGTGGTAAC TTCTTTCTGA CATGGGAGCC TGGGCAGCCT TACTGGCAAC CACACAATAG AGCTGTTGCC CGAAGAATTC AGAACATGGG ATGGAGAGCT GATGGTGGTC TGTGGCTTCT TGTTCGTGGT GGAGGACTTT ATCTTAGCAA AGGCACTGGG ATCACAGAGG ATTTTGAAGA AGTTCCAGTA CAAAGCCGTG GCTTTGGCAT TCTAGATGTT GGATATCGCT CAGAGGAAGA AGCATGGGCA GCAGGAGGCA GTGGAATACT ACTGAGAACA AGAAATGGAG GCAAATCATG GAACCGTGAC AAAGCTGCTG ATAATATCGC AGCTAACCTC TACGCAGTCA AATTTGTGGA TGACAAGAAA GGGTTTGTGC TTGGCAACGA TGGAGTCTTG CTCCGATACG TTGGATGAAA AATTGAAATG GTTTTGTTTC AATCCTTCTC TGCGTTTTGA TACTACATTA CACTGTTATT GTATACATTC CCCTTCATAA AATATATATA ATTTTGTGTT TTTTTCTGAA AAGCTTTGTT TCTCACTGT
Length1319
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9355486.. 9358037
Download Sequence
A.thaliana
AGI-codeAT5G23120.1
Descriptionphotosystem II stability/assembly factor, chloroplast (HCF136)
TAIR curator summaryencodes a stability and/or assembly factor of photosystem II
Alias[HCF136][HIGH CHLOROPHYLL FLUORESCENCE 136]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg946135 RAB GTPase homolog E1B
5.65685 Ahg940830 elongation factor family protein
9.79796 Ahg920732
9.94987 Ahg950897 D-ribulose-5-phosphate-3-epimerase
10.2956 Ahg490399 Albino or Glassy Yellow 1
10.9087 Ahg938013
10.9545 Ahg472502
11.8322 Ahg481233 other RNA
12.49 Ahg938526 sedoheptulose-bisphosphatase
14.1774 Ahg485801 high cyclic electron flow 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression