| Annotation |
|---|
| Description | jgi|Araly1|480951|fgenesh2_kg.4__11__AT2G20990.1 |
| Sequence |
TTGCTTGCCT CCAGGGCTTC ACGATTCTCA CGACATCTGT TTATCTTCTC CGATTTCCAC GTCCATGGAT CTCAGTCAAT GCTCCTTAAT CTCTCTTACC GATTAGTCAA TCCCCACTCA GATCGGTTCC GACGCCGGCG AACTCTGTCC GTCTTGATCT GTGTTTTGTT TTGGTTGCTT GTTGGATCTG AAACGGAAAT CAAGATGGGT TTTTTCAGTA CGATACTAGG GTTTTGTGGA TTTGGAGTTG GGATTTCTCT GGGACTTGTT ATTGGTTACG TTCTATTCGT CTACTTGCTG CCCAACGACG TCAAGGATCT TGAAATTCGT TCAATAGCTG ACCAAGATCC CAAAGCTATG CTACGGATGC TTCCAGAGAT ACCTCTATGG GTCAAAAATC CCGATTTCGA TCGTGTTGAC TGGATTAACA GATTTCTCGA GTACATGTGG CCTTATCTCG ACAAGGCCAT ATGTAAGACT GCAAAGAATA TAGCAAAGCC GATCATTGAG GAGCAGATAC CAAAGTACAA GATTGACTCT GTTGAATTTG AAACACTTAC ACTAGGCTCT TTACCCCCTA CATTTCAAGG GATGAAAGTT TATCTCACGG ATGAGAAAGA GTTGATTATG GAACCATGCT TGAAATGGGC CTCAAATCCC AATATCTTGG TTGCCATCAA GGCATTTGGG TTGAAGGCAA CAGTTCAGGT GGTCGATCTG CAAGTTTTTG CACAGCCCCG TATCACTCTC AAGCCATTAG TCCCAAGTTT TCCTTGTTTT GCCAACATCT ATGTGTCTCT TATGGAGAAG CCACACGTTG ATTTTGGACT GAAGCTTGGT GGAGCAGATC TTATGTCAAT CCCTGGCCTC TACAGATTTG TTCAGGAGCA AATCAAGGAT CAAGTTGCGA ACATGTATCT CTGGCCGAAG ACCCTTGTAG TTCCGATCCT TGACCCTGCG AAAGCATTCA GAAGGCCTGT TGGAATCGTC CATGTAAAAG TTGTGAAGGC TGTGGGGCTG AGGAAAAAAG ATCTGATGGG TGGGGCAGAT CCATACGTGA AAATCAAGCT CTCTGAAGAT AAGATTCCTT CTAAGAAGAC AACAGTTAAA CACAAGAATT TGAATCCTGA ATGGAACGAG GAGTTCAAAT TCTCGGTCAG AGATCCCCAG ACTCAGGTTC TAGAGTTCAA TGTGTATGAC TGGGAACAGG TTGGGAAGCA CGATAAGATG GGTATGAATG TATTAGCTCT GAAAGAAATG GTGCCTAACG AACATAAAGC ATTCACCTTG GAACTGCGTA AGACTCTGGA CGGCGGTGAA GAAGGGCAGA CTGACAAGTA TAGGGGGAAG CTGGAGGTCG AACTCTTGTA TAAGCCATTC ACGGAGGAAG AAATGCAATC TGTACAGAAA GCTCCAGAAG GCACACCGGC TACTGGAGGA ATGCTTGTGG TAATAGTGCA TTCGGCTGAG GATGTTGAAG GAAAGCACCA TACGAATCCT TACGTGCGCA TCTATTTCAA AGGGGAGGAG AGAAAAACGA AGCAAGTGAA GAAGAACAGA GACCCAAGGT GGAATGAGGA GTTCTCCTTC ATGCTCGAGG AGCCTCCAGT CCGTGAGAAG CTGCACGTGG AAGTGCTGAG CACCTCTTCC AGGATAGGTT TATTGCATCC CAAGGAAACA CTGGGGTACG TGGATATTCC GGTGGTGGAC GTGGTGAACA ACAAAAGGAT GAATCAGAAG TTTCACCTTA TTGATTCTAA GAACGGAAAG ATCCAAATCG AGCTTGAGTG GCGAACTGCC TCTTGATTTC TGATTCGTTT CGAGAACAAA CAAAGAGATC ATTGGTTTGA TATTGTTGTA CAAAATGGGC TTTAACTCTG AAAACCATCA TTCAGATTTG CAGAGCCTTC TTTTATTTGG ATTTGTGTGT TTTCAACTTC TCTTCTCTAT GATATTCGGT AGTGTGA |
| Length | 1967 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 108705.. 112000 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G20990.3 |
| Description | synaptotagmin A |
| TAIR curator summary | Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. |
| Alias | [ATSYTA][NTMC2T1.1][NTMC2TYPE1.1][SYT1][SYTA][ARABIDOPSIS THALIANA SYNAPTOTAGMIN A][SYNAPTOTAGMIN 1][synaptotagmin A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.61577 |
Ahg497146 | Endomembrane protein 70 protein family |
| 15.1327 |
Ahg480601 | ubiquitin family protein |
| 21.7715 |
Ahg481584 | Argonaute family protein |
| 21.9317 |
Ahg473889 | succinate dehydrogenase 5 |
| 25.4558 |
Ahg477055 | vacuolar ATP synthase subunit A |
| 32.6343 |
Ahg489666 | GDP-D-mannose 3',5'-epimerase |
| 35.4965 |
Ahg494129 | Rad23 UV excision repair protein family |
| 46.0543 |
Ahg491448 | Sec23/Sec24 protein transport family protein |
| 54.3323 |
Ahg476539 | signal peptide peptidase |
| 65.8179 |
Ahg485477 | Senescence/dehydration-associated protein-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|