Detail



ID : Ahg938119

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938119|scaffold_502310.1
Sequence
TCCCACAAAC CCGTTTTGTA AAATGTCGTC AGCATCTTGT TCCTCTGCCG TGGCGGTATC CGCCGCAGCC ACCGCTTCCT CCGCCGCTAC CTTTAGTCCA TTACTCTTTT CCCACTCCAA CTTCCGGCTC TTCTATCGCT TCACACCAAA ATCCTTCAAA CTCGTTGCCA ATTGCCCTAA TCCACTTATC CTCCATTCAA ATATCCGTCG CCACCGCTTC TTCTGCGCCG CCGAAACCGA AGCTACTTCT GCCGATGAAG AAATCCAGGC ATCACTAGAA GAAGAAGAAG AAGTAGAAGA AGAAGAAGAA GAAGAAGTAG AGGAAGAAGA CGCAGATGAA AAACAGACTA CACAAGCGAG TGGTGAAGAA GGGAGGCTTT ACGTTGGGAA TTTACCTTAC ACAATCACTT CTTCTGAGCT CTCTCAGCTT TTTGGAGAAG CTGGCAATGT CGTCGATGTT CAGATTGTTT ATGATAAAGT CACTGATAGA AGCAGAGGAT TTGGATTTGT AACCATGGGA ACCATCGAAG AAGCTAAGGA AGCGATTCAG ATGTTTAACA GCTCTCAAAT TGGTGGTAGA ACTGTGAAAG TGAACTTCCC GGAGGTGCCG AGAGGCGGAG AGAGAGAAGT AATGAGAACC AAAATCCGTG ATACTAACCG AAGTTATGTC GATAGTCCTC ATAAGATTTA TGCAGGAAAC CTTGGTTGGA ATCTAACTTC CCAAGGTTTA AAAGATGCAT TTGGTGATCA ACCTGGTGTG CTTGGTGCTA AAGTTATCTA TGAAAGAAAC ACTGGGAGGT CTCGGGGATT TGGTTTCATC TCGTTCGAGT CAGCGGAAGA TGTTCAGTCT GCTTTGGCTA CCATGAATGG CGTGGAAGTT GAAGGACGAG CGCTGAGGCT AAATTTGGCT TCAGAGAGAG AGAAAGCCAC CGTATCTCCT CCATCTGTAG AAGAAGGAGA AACCAAAGAG GCCAGTCTAG AGAGTAGTGA GGTGCTTTCG AACGTTAGTA CATGAAGAAA GCAATAGCAC AATAG 
Length1035
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15187854.. 15189116
Download Sequence
A.thaliana
AGI-codeAT3G52380.1
Descriptionchloroplast RNA-binding protein 33
TAIR curator summarychloroplast RNA-binding protein
Alias[CP33][PDE322][chloroplast RNA-binding protein 33][PIGMENT DEFECTIVE 322]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg348440 chloroplast RNA-binding protein 29
13.0767 Ahg482714 RNA-binding (RRM/RBD/RNP motifs) family protein
15.748 Ahg946135 RAB GTPase homolog E1B
21.2132 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
27.9285 Ahg492365 31-kDa RNA binding protein
28.8097 Ahg486711 rotamase CYP 4
29.1204 Ahg489121 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
29.8161 Ahg489681 ribosomal protein S1
30.9839 Ahg918726 Tetratricopeptide repeat (TPR)-like superfamily protein
32.0312 Ahg311903 ALBINA 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression