Detail



ID : Ahg943609

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943609|scaffold_604153.1
Sequence
TCTAGGGTTC TTCATTTTAT CGATGTCGGC GGAGACTTGT TTCGGAAGTT CAGGTGATCA AAGCAGCAAA GGATTGCCTA CTCATGGTGG TAGCTATGTT CAGTATAATG TCTATGGCAA TCTCTTCGAA GTTTCTAGAA AGTATGTTCC TCCTCTTCGT CCCATCGGTA GAGGCGCTTA TGGAATTGTC TGTGCTGCTA CAAACTCAGA GACTGGAGAG GAAGTAGCTA TCAAGAAGAT TGGTAATGCT TTTGACAATA TTATCGATGC TAAAAGAACT TTGAGAGAGA TTAAGCTTCT CAAGCATATG GATCATGAAA ATGTGATTGC TGTCAAGGAT ATAATAAAAC CACCGCAGAG AGAGAACTTC AATGATGTTT ACATTGTTTA TGAGCTTATG GACACTGATC TCCACCAAAT TATACGCTCT AACCAACCGT TAACTGATGA TCATTGTCGG TTTTTTCTGT ATCAGTTGTT GCGTGGCCTC AAATACGTTC ATTCAGCTAA TGTATTGCAC CGAGATTTGA AACCCAGCAA TTTGCTCCTG AATGCAAATT GTGATCTAAA GCTTGGGGAT TTCGGGCTTG CGAGGACCAA ATCTGAGACA GACTTCATGA CTGAATATGT TGTTACACGT TGGTATCGAG CTCCAGAGCT GCTCCTTAAT TGCTCAGAAT ACACAGCAGC AATCGATATT TGGTCTGTCG GTTGTATACT CGGTGAAACA ATGACACGAG AGCCGTTGTT TCCCGGTAAA GATTATGTTC ATCAGCTTAG ACTCATCACT GAGCTAATAG GATCGCCTGA TGACTCAAGC TTGGGATTCT TAAGAAGTGA CAATGCAAGA AGATACGTTA GACAGCTTCC GCAGTACCCG AGACAGAACT TTGCTGCTAG ATTCCCAAAC ATGTCGGCTG GTGCAGTCGA TTTACTGGAG AAAATGCTTG TTTTTGATCC AAGCAGACGC ATCACAGTTG ATGAGGCGTT GTGCCACCCA TATTTGGCAC CGCTGCATGA TATAAACGAA GAACCGGTAT GTGTGAGGCC GTTCAATTTC GATTTCGAGC AACCTACTTT GACAGAAGAG AACATTAAGG AGCTTATATA CCGTGAAACA GTCAAGTTCA ATCCTCAAGA CTCAGTGTGA GAGAGATAAA TATCCTAAAA T 
Length1171
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22872685.. 22874477
Download Sequence
A.thaliana
AGI-codeAT4G01370.1
DescriptionMAP kinase 4
TAIR curator summaryEncodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.
Alias[ATMPK4][MAPK4][MPK4][MAP kinase 4]
Gene coexpression
MR
MR Locus Description
8.60233 Ahg950719 exocyst subunit exo70 family protein H7
15.2315 Ahg484985 RAB GTPase homolog 8A
17.0294 Ahg492913 VPS54
19.2873 Ahg344719 CCCH-type zinc fingerfamily protein with RNA-binding domain
23.4734 Ahg496493 histone deacetylase 6
26.3818 Ahg937735 SER/ARG-rich protein 34A
31.4166 Ahg356451 Mob1/phocein family protein
31.8434 Ahg939897 aminophospholipid ATPase 1
33.2716 Ahg484067 phytanoyl-CoA dioxygenase (PhyH) family protein
33.8231 Ahg483640 Preprotein translocase Sec, Sec61-beta subunit protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression