Detail



ID : Ahg486646

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486646|fgenesh2_kg.5__2638__AT3G61590.1
Sequence
GTCTCTCTGT CTGTCTGTAT CATTCATTCG TATTTACAAT CGAGCCACGA AACGTCTCTT CTTCTATAAA GACCAGATTT TTCTCAATCT CAATCTCTCT CTCGCTCTCG TTTTCTTTGA TGAACCCTTT TACCTCATTT TTACTCTTAA ATCCAAAAAT CCGAGAAACC CATTTCATTT CCATCTTCTA TTTCTAGGAA AATCTCATCT TTTCGGTCTT CTCAATAAAC CGAGATCCAC GAAACCCGCA TTTCCTCTCG CAAATCGATT AAAAATTTCG ATACTTTTTA TCGGTTTGAA TCTCGAGAAT TCGGAAGATT CAGAGACCCA CGAGTATCCA TAGTCGAAGT GGCTCTTGAG AATGGAAGCA GAAACGTCTT GGACTAATTA TCCGTACAGC TACATTACTT ATGTCCCTGA AGCTGAATCA TACCGTGAGC AGAGCGATGA TGAAGCCAAA GTTGAAACCT TTTCAATGGA TTCTCTTCTC CCTGACGATT TATTAGAACG AATCCTCTCG TTTCTACCCA TTGCAAGCAT TTTCAGAGCT GGTACTGTCT GCAAAAGATG GAACGAGATT GTATCTTCTC GGAGGTTCTT ATGTAATTTC TCCAACAATT CTGTTTCTCA AAGGCCTTGG TACTTCATGT TCACTAGCAC GGATGATCCA TCGGGTTATG CTTATGACCC GATTATCCGG AAATGGTACA GTTTCGATCT CCCTTGTATC GAAACATCGA ATTGGTTTGT TGCTTCCTCT TGTGGATTGG TTTGTTTCAT GGACAATGAT TGCAGAAACA AGATTTATGT CTCAAATCCA ATTACCAAAC AATGGAGGAG GCTTATTGAA CCTCCCGGTC ACAGATCGAC AGATTACACG GCAATGTCTA CCTCCGTGAA CCGAGCTAAC CAATCAAACA GAGCAGTAAC ACGTGGAAAC CGGACTTACT CAGTCTCTAT AGTGAAATCG AAGCAAGTTA CTGGGAATTT CTTCCAATGG GATATCTCTA TTCATCTCTA CAGCTCTGAA ACAATGACTT GGACAACATC AGTAACCGAT GTCTTATCCG GATGGAGAGG AGGAAACGAG AGTGTGATCT GCAACGATGT TCTTTACTTC ATGATTTACC CCACGGGAGG CTCAGATCAT CGACACGGCT TGATTGCTTC CAATCTATCC TCGATTGGAT CATCGTCAAG CGGCATCTTG ATGAGGAGTT TCATTCCAAT GCCGTGTTCT TTAACCTGCG GAAGATTGAT GAATCTAAGA GAGAGGCTTG TGATCGTTGG AGGAATCGGG AAACACGATC GACCAGAGGT TATAAAAGGA ATTGGGATTT GGGTTCTGAA AGGGAAAGAA TGGGTAGAAA TGGCTAAAAT GCCTCAAAGA TTCTTCCAAG GTTTTGGTGA ATTCGACGAG GTTTTCGCGA GTAGTGGCAC TGATGATTTG GTTTACATTC AAAGCTATGG ATCTCCCGCG CTTCTCACTT TCGACATGAA TCTCAAGTAC TGGAGATGGT CTCAAAAATG TCCTGTTACT AAGAAGTTCC CTCTTCAGCT CTTTACTGGG TTTTGCTTCG AACCAAGACT CGAGATTGCT CCGTAGTTGC AATGAAGAAG CAAATGGGTC TGCAAAAGTC TTAGTCTTTT GGATTGTTTT TGCACAGAGA AATCGCCGGC GGTTTGATGA AGATGATACG GTAATGTTTT TAATTTTTGG AATGTTTTAT TTGCAACTTG GTACTCTATT AATTATAAAT TT 
Length1762
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19243684.. 19246102
Download Sequence
A.thaliana
AGI-codeAT3G61590.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias[HS][HWS][HAWAIIAN SKIRT]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg493953 HD domain-containing metal-dependent phosphohydrolase family protein
20.7846 Ahg483113 initiator tRNA phosphoribosyl transferase family protein
28.6182 Ahg918895 cytochrome c oxidase assembly protein CtaG / Cox11 family
39.3192 Ahg490568 ARM repeat superfamily protein
41.4608 Ahg493666 Uncharacterized protein family (UPF0016)
51.2348 Ahg487690 Pentatricopeptide repeat (PPR) superfamily protein
54.2218 Ahg921783 no pollen germination related 1
58.2237 Ahg487696 GC-rich sequence DNA-binding factor-like protein
82.2922 Ahg478170 Leucine-rich repeat protein kinase family protein
82.9518 Ahg471898 KU70 homolog
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression