Detail



ID : Ahg486746

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486746|fgenesh2_kg.5__2738__AT3G62410.1
Sequence
GAAATATCTT CTTTTATCAA AAACGTGTAT CTTCTCCATC CAAAGATGGC AACTATAGCT ACTAGTCTTA ACATTGCAAC CCAACGTGTC ATCGTCACCA GCGAGAATAG ACCAGTTCGT CTCGCCGGTC CAGTCCATCT GAACAATCCG TGGAATCTTG GGTCAAGAAC AACCAACCGG ATGGTGAAAC TTAAGCCGAT TAGAGCAGCA CCGGAAGGAG GGATATCGGA TGTAGTGGAG AAAAGCATTA AGGAAGCTCA AGAGACTTGT GCGGGCGATC CTGTGAGCGG AGAGTGTGTA GCTGCGTGGG ACGAGGTTGA AGAACTTAGC GCTGCAGCTA GCCATGCTAG AGACAAGAAG AAAGCTGATG GTTCGGACCC TTTGGAGGAA TACTGCAAAG ATAACCCTGA GACGAACGAG TGCCGTACTT ACGACAACTG AAGCGATCAA GATCATGTTC CTCTCAATTA CCTCTAGAAA CATTTGTAAT TTGTAGTTCC ATAAACGAAT ACAAAAGTCA AAATTTCA 
Length528
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19672682.. 19673224
Download Sequence
A.thaliana
AGI-codeAT3G62410.1
DescriptionCP12 domain-containing protein 2
TAIR curator summaryCP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494.
Alias[CP12][CP12-2][CP12 DOMAIN-CONTAINING PROTEIN 1][CP12 domain-containing protein 2]
Gene coexpression
MR
MR Locus Description
9 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
11.4891 Ahg490231 photosynthetic electron transfer C
14.1774 Ahg471375 Pentapeptide repeat-containing protein
14.7309 Ahg942711 Chaperone DnaJ-domain superfamily protein
16.1555 Ahg490821 serine transhydroxymethyltransferase 1
16.7332 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
18.2209 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
23.0651 Ahg496993 ferredoxin-NADP(+)-oxidoreductase 1
23.2379 Ahg922278 phosphoribulokinase
23.6432 Ahg347932 DNAse I-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression