| Annotation |
|---|
| Description | jgi|Araly1|490821|fgenesh2_kg.7__254__AT4G37930.1 |
| Sequence |
AAAAGAGGGA AAAAATTCGA AAATTTTCTG CAACCACCAA AAGCTCAGCC AAAAGCAGAG GCCACAATTC TCTCTTCATC TCTCCACAAG ATAAACCCAA TTTTGTTTTT TTTTTTGTTC ATGTTTCAAA TCTGTTTCTA GGGTTTCACA AACCAGAGAG AGAGAGAGAG AGGTTTAGCG AAAAATGGCG ATGGCCATGG CTCTTCGAAG GCTTTCTTCT TCAATTGACA AACCCATTCG TCCTCTTATC AGATCCACTT CTTGTTACAT GTCTTCGTTG CCCAGTGAAG CTGTTGATGA GAAGGAGAGG TCTCGTGTCA CTTGGCCAAA ACAGCTTAAC GCACCTTTAG AGGAGGTTGA CCCTGAGATT GCTGACATTA TTGAGCATGA GAAAGCTAGA CAATGGAAGG GACTTGAGCT TATTCCATCT GAGAACTTCA CATCTGTTTC CGTGATGCAA GCTGTTGGGT CTGTGATGAC TAACAAATAT AGTGAAGGGT ATCCTGGTGC GAGATACTAT GGAGGAAATG AGTACATAGA CATGGCAGAA ACCTTATGCC AGAAGCGCGC TCTTGAAGCT TTCCGGTTAG ATCCTGAAAA GTGGGGAGTG AATGTGCAAC CTTTGTCTGG ATCTCCTGCC AACTTCCATG TCTACACTGC ATTGTTAAAG CCTCATGAAA GAATCATGGC TCTTGATCTT CCTCATGGTG GTCATCTTTC TCATGGTTAT CAGACTGACA CCAAGAAGAT ATCTGCTGTG TCTATCTTCT TTGAAACAAT GCCTTATCGA TTGGACGAGA GCACTGGCTA CATCGACTAC GATCAGATGG AGAAAAGCGC TACTCTTTTC AGGCCAAAAC TGATTGTTGC TGGTGCGAGT GCTTATGCTC GATTGTATGA TTATGCCCGC ATCCGAAAGG TCTGTAACAA GCAAAAAGCT GTAATGCTAG CAGATATGGC ACACATCAGT GGTTTGGTTG CTGCTAATGT AATCCCTTCA CCGTTCGACT ATGCTGATGT TGTAACCACC ACAACCCACA AGTCACTTCG TGGACCCCGT GGAGCCATGA TTTTCTTCAG AAAGGGTGTT AAGGAAATTA ACAAACAAGG GAAAGAGGTT TTGTATGATT TTGAAGACAA GATCAATCAA GCTGTCTTCC CTGGTCTTCA AGGTGGACCA CACAACCACA CTATTACAGG ATTAGCTGTT GCTTTGAAAC AGGCAACTAC TTCAGAGTAC AAAGCATACC AAGAGCAAGT CCTGAGTAAC AGTGCAAAGT TTGCTCAGAC TCTGATGGAG AAAGGATATG AACTTGTTTC TGGTGGAACT GACAACCATC TGGTTCTAGT GAATCTGAAA CCCAAGGGAA TTGATGGATC TAGAGTTGAG AAAGTGTTGG AAGCTGTTCA CATTGCATCC AACAAAAACA CTGTTCCTGG AGATGTTTCT GCCATGGTTC CTGGTGGAAT CAGAATGGGT ACTCCTGCTC TCACTTCCAG AGGCTTTGTT GAGGAAGACT TTGCCAAAGT AGCTGAATAC TTCGACAAAG CTGTGACATT GGCTCTCAAA GTCAAATCTG AAGCTCAAGG AACCAAGCTG AAGGATTTTG TGTCAGCAAT GGAATCTTCT TCAACCATTC AATCCGAGAT TGCGAAACTG CGCCATGAAG TCGAGGAGTT CGCTAAGCAG TTCCCAACAA TTGGTTTTGA GAAAGAAACC ATGAAGTACA AGAACTAAAC TGTTTTATCC CACAAGTCTT TTTTATCATG CTTTGAATTC CCATGGAATG TATAGATGAT ACATGTAAAA CACTATTTTA CGCTATGCGA AAAATAATGA TCTGCAAAAT |
| Length | 1850 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 951411.. 954665 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G37930.1 |
| Description | serine transhydroxymethyltransferase 1 |
| TAIR curator summary | Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants. |
| Alias | [SHM1][SHMT1][STM][serine transhydroxymethyltransferase 1][SERINE HYDROXYMETHYLTRANSFERASE 1][SERINE TRANSHYDROXYMETHYLTRANSFERASE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg473747 | glyceraldehyde-3-phosphate dehydrogenase B subunit |
| 1.73205 |
Ahg490231 | photosynthetic electron transfer C |
| 2.44949 |
Ahg491508 | ATPase, F0 complex, subunit B/B', bacterial/chloroplast |
| 2.82843 |
Ahg496993 | ferredoxin-NADP(+)-oxidoreductase 1 |
| 3.16228 |
Ahg922278 | phosphoribulokinase |
| 4.58258 |
Ahg491390 | glycine decarboxylase P-protein 1 |
| 5.19615 |
Ahg922911 | Chlorophyll A-B binding family protein |
| 5.65685 |
Ahg475922 | hydroxypyruvate reductase |
| 6.16441 |
Ahg487193 | glutamate synthase 1 |
| 6.7082 |
Ahg478862 | Aldolase-type TIM barrel family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|