| Annotation |
|---|
| Description | jgi|Araly1|487281|fgenesh2_kg.6__415__AT5G04940.2 |
| Sequence |
TTTGTTTCCC TCTCTTTCTC TGTGTCTCTC TCTTTTCGGA AACCCTAATT TCGCGAGCCA GCTTGAAAAG GGTGTGTGGT GTGATCTATC CAAAAGCGCA TTTTCAGGTT TAATTTGTGA AAGTTTTAAG CTTTTTGCTT TGTTTATTGT AATCTCTGAA TCTGCGATGA TGGTTGTTTC TCTGTGCATG CAATTGGCTT TTTGAGGATC TCTGATTCGT TGTTGGGTTT ATTTGTGAAG AAAAAGTTGG GACTTTTTAC TTTCCCAGAT CTTTGATAGC TTAATGGAAG GGAATGGTGG TAACTACACT GATAAGACGA GAGTGTTGGA TATTAAGCCA TTGCGTACTC TAAGACCCGT GTTTCCCAGT GGAAATCAAG CTCCGCCTTT TGTCTGTGCA CCTCCTTTTG GACCATTTCC TCCTGGGTTC TCATCGTTTT ATCCGTTTAG TTCGTCTCAA GCGAGTCAAC ACACACCAGA TCTTAATCAA GCTCAGTATC CACAGCAACA TCAGCAGCCG CAGAATGCAT CTGAGCCTTC TTTGGTTACT CCTTTAAGGT CTTTTAGATC TCCTGATGCG TCTAATGGCA ACACGGAGCT TGAGGGGTCA ACTGTGAAAA GAAAGATCCC TAAAAGGCGT CCTATTGCTC GGCCTGAGAA TATGAATTTC GAGAGTGGGA TTAACGTGGC TGAAAGAGAG AATGGCAATA GGGAGTTGGT GGTGAGTGTT CTTATGCGGT TTGATGCGTT AAGAAGAAGG TTTGCACAAC TTGAGGATGC AAAGGAAGCA GTTAGTGGGA TTATCAAACG CCCTGATTTG AAAGCAGGAT CTACTTGTAT GGGCAGAGGG GTCCGGACAA ACACCAAAAA AAGACCTGGT ATTGTTGCTG GCGTTGAGAT CGGGGACGTA TTCTTCTTCA GGTTTGAGAT GTGTTTGGTG GGTTTGCATT CTCCATCAAT GGCCGGGATT GACTATTTGG TTGTCAAGGG AGAAACGGAG GAAGAACCTA TCGCCACTAG CATTGTGTCA TCTGGATATT ATGATAATGA CGAAGGTAAT CCCGATGTTT TGATTTATAC TGGTCAGGGT GGTAATGCTG ATAAAGATAA GCAATCATCC GACCAAAAGC TCGAAAGGGG TAATCTTGCC TTGGAGAAGA GCTTGCGTAG AAATAGTGCA GTTAGGGTAA TAAGAGGCTT GAAAGAGGCT TCTCATAATG CTAAGATCTA TATTTATGAT GGACTCTATG AGATTAAAGA GTCATGGGTA GAGAAAGGAA AGTCGGGACA CAACACCTTC AAGTATAAAC TGGTTAGAGC TCCTGGTCAA CCTCCTGCAT TTGCTACATG GACTGCAATC CAGAAATGGA AGACGGGTTT GCCTTCAAGG CAAGGACTTA TTCTCCCCGA TATGACTTCT GGGGTTGAAA GTATACCTGT TTCACTTGTT AACGAAGTTG ATACCGACAA TGGGCCTGCT TATTTCACCT ACTCCACAAC GGTTAAATAC TCAGAGTCGT TTAAGCTGAC ACAGCCTTCT TTTGGATGTG ATTGTGCCAA CTCATGCAAA CCAGGGAACT TGGACTGTCA CTGCATAAGG AAAAATGGAG GTGATTTCCC CTACACCGGT AATGGAGTTC TAGTTAGCCG CAAGCCTATG ATATATGAAT GCAGTCCATC TTGCCCGTGC TCGACTTGCA AAAACAAGGT GACTCAAATG GGAGTAAAAG TGAGGCTGGA AGTTTTCAAG ACAGCGAATA GAGGATGGGG CTTGCGCTCA TGGGATGCTA TTCGTGCTGG TTCGTTTATA TGCATATATG CAGGTGAGGC CAAAGACAAA TCGAAGGTGC AGCAAACTAT GGCTGATGAT GATTATACTT TTGATACAAC CCATGTCTAT AACCCTTTCA AGTGGAACTA TGAGCCTGGC TTAGCAGACG AAGATGCTTC TGAAGAGATG TCTGAAGAAT CTGAAATCCC GCTGCCACTG ATAATCAGTG CTAAGAATGT TGGGAACGTT GCCCGATTCA TGAATCATAG TTGCTCGCCT AATGTTTTCT GGCAGCCGGT CACTTATGAA AATAACAGTC AACTCTTCGT GCATGTCGCC TTCTTTGCCA TTGCTCACAT CCCTCCAATG ACTGAGTTAA CTTACGACTA TGGAGTATCT AGACCAAGTG GGACTGAAAA TGGCAATCCT TTATATGGCA AAAAGAAATG CTTTTGTGGA TCAGCGTATT GCCGTGGCTC ATTTGGATGA TGATGGGGAG AAAAGTGATC TCTGCTGAAC AACTGGAGTC TGACGATTTT GGTAGCAAAA GGCAGGTGGA GTGTTGAGTC CTGATCTGTG GAATCGAGTA CTTTTGGTAG CAACTAAAGT AAGTCTCTTT GATCTTCTCT TCAACAGCAT AAGACGCAAA GCTGTGAAGG ATTTTTACTG CTTCTCCAGC AGAAACCTTA TCTATTTCTC GGATTGTGGA AGATGTCCTC ATGTTTTTCT CCTTTTGGAT ATGTAATCAT ATTAGTCAGT GTTCGGATCG GTTTTAGGAC AAATCTCTGG AAACTCTAGC CTCTTTTGAT TATAAAGATT TTTTTTATGT GAATGTGA |
| Length | 2608 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1663207.. 1665967 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04940.1 |
| Description | SU(VAR)3-9 homolog 1 |
| TAIR curator summary | Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. |
| Alias | [SUVH1][SU(VAR)3-9 homolog 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg485584 | Dihydrolipoamide acetyltransferase, long form protein |
| 5.09902 |
Ahg923761 | NUP50 (Nucleoporin 50 kDa) protein |
| 6 |
Ahg476259 | Vps52 / Sac2 family |
| 6.245 |
Ahg474459 | phosphoenolpyruvate carboxylase 1 |
| 7.07107 |
Ahg479458 | PTEN 2 |
| 7.14143 |
Ahg923937 | regulatory particle triple-A 1A |
| 10.198 |
Ahg892011 | RING/U-box superfamily protein |
| 12.8452 |
Ahg495124 | SUMO-activating enzyme 1B |
| 13.1149 |
Ahg931973 | Secretory carrier membrane protein (SCAMP) family protein |
| 13.7477 |
Ahg934616 | phosphorylethanolamine cytidylyltransferase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|