Detail



ID : Ahg892011

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892011|Al_scaffold_0006_7
Sequence
ATGGAAACGC CCGGCGGCAA TCATGATTCC TTTAGGGGTT CTCCTCGTAG AAACTCCATC CTCTCTGCTT CTAACATCAT CCAGGCCCCC ATTTCTACCT TGTTAGAGTA TTCGGGTCTC TTTCGCACTA GGCCTAATCC TAGTCACGAG GCTGAAACGC TGGTCAGTGA TGATTCTTCA GGAATCTCCA ATGGGGAGGT TGCCATTAGG ATCATTGGCA ACGGGGAGCA GGATCCTGAA ACTGATAGCA ATGGTCTCAG GGAACCCGGC GGCCTTGGAC ACACTGAACT TTTGGGTTCT CCTACTCAGG TTGATCCCAT AGGAGGTGCT CCTGCAGAAG GTGCCTCTCA GGATGCTCCT GGTGAATCTG TTGCTGGAGA CGCCGCTACC CGGGATTCAC CTTACCAAAG ATATGATATT CAGCAGGCTG CACGCTGGAT TGAGCAAATT CTTCCCTTTT CTTTGCTTCT GTTGGTTGTT TTTATCCGTC AGCATTTGCA GGGGTTCTTT GTCGCTATTT GGATTGCTGC TGTCATGTTC AAGTCAAATG ATATTCTCAA GAAGCAAACA GCTTTAAAGG GTGAGAGGCA TATCTCTGCA TTAATTGGAA TCTCTGTAGC ATTTACGGCC CATGTTGTTG GTGTTTATTG GTGGTTTAGG AAAGATGACC TCTTGTATCC CTTAATCATG CTGCCTCCAA AGTCCATACC ACCTTTCTGG CATGCCATTT TTATCATAGT GGTTAATGAT ACACTTGTCC GACAGGCCTC AATGATTTTC AAGTGTTTTC TGTTGATGTA CTACAAAAAC AGTAGGGGTC GAAATTATCG TAAACAGGGT CAATTGCTAA CTTTGGTTGA ATATTTGATG CTTTTGTATC GCTCTTTACT GCCTACCCCT GTATGGTACC GTTTCTTCTT GAACAAGGAT TATGGAAGCC TCTTCTCCTC TCTTATGACG GGATTATATC TTACATTCAA GCTCACTTCA GTTGTTGAGA AGGTTCAATC CTTCTTTACG GCATTGAAGG CTTTGTCACG TAAAGAGGTG CATTACGGAT CATATGCAAC TACAGAGCAG GTAAATGCGG CAGGCGACCT GTGTGCCATC TGCCAGGAGA AGATGCACAC CCCAATTCTT CTTCGCTGCA AACACATGTT TTGCGAAGAT TGCGTTTCGG AGTGGTTTGA GAGAGAGAGA ACGTGTCCTC TGTGCAGGGC CTTGGTCAAA CCAGCAGATC TAAAATCATT CGGTGATGGA TCCACCAGCC TCTTCTTCCA GATTTTCTGA 
Length1290
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23485.. 25453
Download Sequence
A.thaliana
AGI-codeAT5G01960.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg495433 Ypt/Rab-GAP domain of gyp1p superfamily protein
4.12311 Ahg483447 electron-transfer flavoprotein:ubiquinone oxidoreductase
5.47723 Ahg479619 translocation protein-related
8.3666 Ahg496989 calcium-dependent protein kinase 28
10.198 Ahg487281 SU(VAR)3-9 homolog 1
12.8062 Ahg471773 Transducin family protein / WD-40 repeat family protein
15.3948 Ahg329104 dentin sialophosphoprotein-related
18 Ahg487697 transducin family protein / WD-40 repeat family protein
19.7484 Ahg486257
20.9762 Ahg488545 binding partner of acd11 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression