Detail



ID : Ahg488284

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488284|fgenesh2_kg.6__1418__AT5G14420.2
Sequence
AAACAAACCA AATACAAACA GAGGAAAGTG AAATTGCTTT CGAGCAAAAG GAGGAAACTT TAAAGGCGAA CTCTTTTGGA TTCGATCCGC CATTGAAGCT CCTTTGACTC TCTCTCAAAC ACTTCTCTGA TTCGTCATCC CGCTGCGTCG TTAAGTTTAA AGGGTACTGA ATTGACTTAA GAGGTTTGAT TTGAATCTAG AAAGGTTTAG TTTTTTGTTA AGTTTGATGG GGACAGGGAA TTCTAAAGAG AACTGGAGAC AGTCATCGTT TAGGTCAGCT TCAGCTTCAT CAGCATCACC ATCTTCATCT TCATGGGCTT CTCAACAAAG TTATCCTCAG TATGGTGCAG AAAGCTACAA TTATCCTCCT CCACCTTCAT ATGCTCCACC TCCTGAGTAT ACGCAAACGC AACCTCCTCC ACCTTTATAT AGTACTCAGC CTTATTCTGC ACCGCCTTCT CAAAGCTATG GTAGTGATAA TAAGAAGAGG TTGGAGCGCA AGTATTCGAA AATTTCTGAT GATTACTCTT CTTTGGAGCA GGTGACGGAG GCTCTTGCAC GGGCAGGTCT AGAATCATCA AATCTCATCG TTGGTATTGA TTTCACTAAG AGTAACGAAT GGACAGGGGC CAGGTCCTTC AATAGGAAAA GCTTACATTT CATAGGCAGT AGTCCCAATC CTTACGAACA AGCGATAACT ATCATAGGAA GAACCTTAGC CGCCTTTGAC GAGGACAACT TGATTCCATG TTATGGTTTT GGAGATGCAT CAACACATGA CCAAGACGTG TTCAGTTTCA ATTCGGAGGA TAGATTCTGT AATGGATTTG AGGAAGTACT TGCTCGGTAT AAAGAGATCG TGCCTCAACT TAAGCTCGCA GGGCCAACCT CGTTTGCTCC GATCATCGAT ATGGCCATGA CCATTGTTGA GCAGAGTGGT GGGCAATATC ACGTCCTAGT GATAATAGCA GATGGACAGG TTACAAGAAG TGTTGACACG GAAAATGGAC AGTTAAGTCC GCAGGAACAG AAGACAGTAG ATGCGATCGT GCAAGCGAGT AAGCTTCCTC TATCAATCGT CTTAGTCGGG GTGGGGGATG GACCTTGGGA CATGATGAGG GAATTTGACG ATAATATCCC GGCCCGAGCA TTTGATAACT TCCAATTCGT GAACTTCACA GAGATCATGG CAAAGAACAA AGCTCAATCC TTGAAGGAAA CAGAGTTTGC CCTTTCTGCT CTCATGGAGA TTCCTCAACA GTACAAGGCG ACAATAGAGC TTAACCTTTT AGGAAGAAGA AATGGGAATA TCCCGGAGAG ATTCCCTCTT CCGCCTCCAA TGCACGGTGG ATCATCGTCC TACAAGAGTC CAAAGCCTTT CCGTCCTCCA AGTTTCAAAC CGAGTGTTCC TCCTCATCCA ACTGAAGAAA GCTATCACGT AAGGTCTAGT CACGTCCCAC CCCCTACAAA CTCTGCTTCT GATAACCAGC TATGTCCGAT TTGTTTGAGC AACCCGAAAG ACATGGCCTT TGGTTGTGGC CATCAGACTT GTTGCGAGTG TGGACCAGGT CTTCAAATGT GTCCGATTTG CCGTGCACCA ATCCAGACAA GAATAAAGCT CTACTAACAA ACAAGTAGAC CAGATCGACG ACCCTTCTCT CTTGTTCATC TTCTTACAAC TTCTTTTGGG AATTTAGTTT GATCTAATCA CTGAAATTTC TCCGAGAAAG ATCGGATCTT TTTTCCTAAC TTGATCTTGT TCCAAAATCT TTGACTTGTT TCTTTCTTTT TTCTTTGCTT GGAGTAAAAA TGATGTTATT C 
Length1821
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5607154.. 5610329
Download Sequence
A.thaliana
AGI-codeAT5G14420.1
DescriptionRING domain ligase2
TAIR curator summary
Alias[RGLG2][RING domain ligase2]
Gene coexpression
MR
MR Locus Description
11.3137 Ahg924045 calpain-type cysteine protease family
14 Ahg486308 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.0712 Ahg939036 squamosa promoter-binding protein-like 12
27.1293 Ahg928298 Rab escort protein
31.4325 Ahg476560 glycine-rich RNA-binding protein 5
34.0588 Ahg472433 phosphatidylinositol-4-phosphate 5-kinase 1
44.6654 Ahg485242 RNI-like superfamily protein
48.621 Ahg323324 RNA helicase, ATP-dependent, SK12/DOB1 protein
50.4777 Ahg484824 dicer-like 3
55.9017 Ahg488829 Telomerase activating protein Est1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression