Detail



ID : Ahg488627

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488627|fgenesh2_kg.6__1761__AT5G17600.1
Sequence
GCCCAAAGAT AAGGAGAGAA AGAGAGAGTG ACACTTCACC ACACCATCTC CTCTCTCTCT TCTTCTTCTT CTTTCTCTGC TTCTGCAACA CAAAAACACC ATCAAGAATC AAATGCCAAA CCCTAATCCA TGGTCACCAT ACGATTCCTC CTACAACGAT TGCTCTCAAG GAATCTGCAA CATCTACTGT CCTCAATGGT GTTACCTAAT CTTCCCTCCT CCTCCTCCTT CTTTCTTCCT CGACGACGAC TCTTCCTCCT CCTCCTCCAG TTTCTCTCCT CTCCTCATCG CTCTCATCGG AATCTTAACC AGCGCCTTCA TCCTCGTCAG CTACTACACT CTCATCTCCA AGTACTGTCA TCGCCACCAC CAAACCTCCT CTTCAGAGAC TCTTAACCAT AACAGTGACG GTTTCTTCTC CTCCACGCAA AGAACCTCTG CGACTGGAGA TGGACTCAAC GACTCTATGA TTAAATCAAT CACAGTTTAT AAATACAAGA AAGGAGATGG ATTCGTCGAT GGTTCTGATT GCTCTGTTTG TTTGAGTGAA TTTGAAGAAA ACGAGAGTTT GAGATTGTTG CCGAAATGTA ATCACGCGTT TCATCTTCCT TGTATTGATA CTTGGTTGAA ATCTCACTCT AATTGTCCAC TTTGCCGCGC TTTTGTCACC GGAGTTAATA ATCCCACCGC CGCCGTCGGC GAGGCTGGTT CAGTTGTTGT AGCTAACCAA TCGAGTTCCG TTCATCAACC CGGTTCGGTA TCCGAAATCA ATTTGAATTT GGCCGGTTAC CAACACCAAA CCGGCGATTT TGATTCCGTT GTTGTAATTG AAGATCTGGA AATTGGTTCT CCGAATAGTG ACGGTAGATC GGAATTACTA CCAGTGGAGG AGCGACGGGA CTCTAAGGAT GAAGATTCGC TGCCGATTCG GAGATCTGTA TCGTTGAACT CGGGTGTAGT GGGTGTTTCG ATTGCTGATG TATTGCGAGA GATCGAAGAC GAAGAAGAAG AAGAATCCGG CGGTGTTGGA ACTTCGCAGC GGCGACAGGA AGGGGAAGAT GGCGATGGGA AGACGCTTCC ACCGACGGAG GCGAATCAGA GAAGCGGCGG AGTATCGAAT TTTCTGGTAC GGAGTTTATC GACGGGAAGA TTTATTTTCT CGAGGTATGA TCGAGGGCGA AATTACCGTT TACCCAATTA AATTAACTGT TTTTTTTTTT TTCTTTCTTT TTACTGTATT TACTGATAAA TAATAGTGAA TTAGTGATTT CTTTTTGAAG GCTGAGAAAA AGTGATGATT ATT 
Length1303
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6927042.. 6928430
Download Sequence
A.thaliana
AGI-codeAT5G17600.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.3623 Ahg491144 catalase 2
21.4942 Ahg494942 Domain of unknown function (DUF1995)
21.5639 Ahg921142 NAD kinase 2
23.0217 Ahg483787 SPA (suppressor of phyA-105) protein family
24.1661 Ahg487877 kinesin like protein for actin based chloroplast movement 1
38.9872 Ahg486618 plasma membrane intrinsic protein 1A
41.3763 Ahg476410 Homeodomain-like/winged-helix DNA-binding family protein
45.8258 Ahg482978 ACT domain-containing protein
46.2817 Ahg945660 CBL-interacting protein kinase 8
48.9898 Ahg923463 FTSH protease 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression