Detail



ID : Ahg485801

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485801|fgenesh2_kg.5__1793__AT3G54050.1
Sequence
CCAAAACCAA ACCTTGCAAA GTTTTTTTCA GAAGCAGACA CAAAAAATGG CAGCAACCGC CGCAACAACG ACGTCGTCTC ATCTTCTTCT CTCAAGCTCA CGTCACTTGG CGGCATCGTC TCAGCCTTCA ATCCTTTTCC CGAGATCTCT GTTCTCCAAT AACGGGAAAC GAGCAACTAG TGGAAGAAAC CATCATGTTG GTGGTGGAGT GAGGTGTATG GCGGTGGCGG CGGATGCTGC TGCGGCGGCA GAGACGAAAC CAGCGGTAAG GAAGAAGAGT GGATACGAAC TCCAAACGTT GACGAGCTGG TTGTTGAGAC AAGAGATGAA AGGAGAGATA GATGCAGAGC TGACGATAGT GATGTCGAGT ATATCTATGG CTTGTAAACA GATCGCTTCA CTTGTTCAAC GTGCCGGAAT ATCTAATCTC ACCGGAGTTC AAGGCGCCGT TAATATCCAG GGAGAGGATC AGAAGAAGCT TGACGTCATC TCTAATGAGG TGTTTTCCAA CTGCTTGAGA TCAAGTGGAA GAACGGGAAT CATTGCCTCG GAGGAAGAGG ACGTGCCAGT AGCGGTGGAG GAGAGTTACT CCGGCAACTA CGTCGTCGTG TTTGACCCTC TTGACGGTTC CTCCAACATT GACGCTGCTG TCTCTACCGG TTCTATCTTC GGTATCTATA GCCCCAATGA CGAATGTATT GTCGACGACT CCGACGATAT CTCAGCTCTT GGGTCAGAAG AACAAAGGTG TATAGTAAAC GTGTGCCAGC CAGGGAATAA CTTGCTAGCA GCCGGCTACT GTATGTACTC GAGCTCAGTT ATCTTCGTTC TTACTCTAGG CAAAGGCGTT TTCTCCTTCA CGCTCGATCC AATGTACGGT GAGTTTGTCC TCACGCAAGA AAACATTGAG ATCCCCAAAG CCGGGAAAAT CTACTCTTTC AACGAAGGAA ATTACCAGAT GTGGGACGGG AAGCTGAAGA AGTACATTGA TGACCTCAAG GACCCTGGTC CAAGTGGGAA ACCTTACTCA GCAAGGTACA TTGGAAGTTT GGTTGGAGAT TTTCACAGGA CTTTGTTGTA TGGTGGGATT TACGGGTACC CTCGTGACGC GAAGAGCAAA AACGGAAAGC TTAGGCTTTT ATATGAGTGT GCACCAATGA GTTTCATTGT TGAACAAGCT GGAGGGAAAG GTTCTGATGG ACACCAGAGA GTACTAGATA TCCAACCGAC GGAGATACAT CAGAGGGTTC CACTATACAT TGGAAGCACA GAGGAAGTAG AGAAGCTGGA GAAGTACTTG GCTTGACTCA TGTACCAAAC ATAAGCCATT TAATTTCTAT TGTAAGCCAA TTTCTGACTA CATGGTATAT GGAAATAGAT GCATAATGGT GAAAGTCCTA TTTTGTTGTC AATATCAATA TAGAGAAATC AGCTGTTAAA ACAATAGACC AAAAACCCAA GTTTAATTTA TACAACTACA TGTAATA 
Length1487
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G54050.1
Descriptionhigh cyclic electron flow 1
TAIR curator summaryEncodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).
Alias[HCEF1][high cyclic electron flow 1]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
4 Ahg938526 sedoheptulose-bisphosphatase
5.2915 Ahg924950 2Fe-2S ferredoxin-like superfamily protein
7.74597 Ahg490821 serine transhydroxymethyltransferase 1
8.24621 Ahg922278 phosphoribulokinase
8.66025 Ahg482998 rubisco activase
9.48683 Ahg946135 RAB GTPase homolog E1B
9.94987 Ahg922911 Chlorophyll A-B binding family protein
10.247 Ahg478862 Aldolase-type TIM barrel family protein
11.6619 Ahg471025 chloroplast RNA binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression