Detail



ID : Ahg490517

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490517|fgenesh2_kg.6__3651__AT4G00490.1
Sequence
CAATGGTTCT TGGATCCGTT TAGTAATGGC GATTAGGTTG AATCATTGTG TAATTCCAGT GAGCGTGAAG CTTGGAGCTC CGGCGAGAGT ATCAGCTCGG AGCTCGTTAC CGTTTAGCGT TGGAGATTGG CGTGGTGTTT CTACATTTTC TGGTGCTAGG CCGTCGTTGG TTTCTGCCAA AGTGAAACAG AGAGCAGAGA GTACTGAGGA GGATCCAGTT CCAATTGATG ACGACGATTC TACTGATCAG CTCGTTGATG AAGAAATTGT GCATTTTGAA GAGCGTGATT TTTCTGGCAC AGCGCGTGTT CCCGTATATG TTATGCTACC ATTGGGAGTC ATTGATATGA ACTCGCAAGT GGTTGAACCG GAAGAGCTTT TGGATCAGTT AAGAACCTTG AAGTCGGTTA ATGTTGATGG TGTTATGGTT GACTGCTGGT GGGGAATTGT CGAGGCTCAT ACACCACAGC TCTATAATTG GAGTGGTTAC AAGAAACTCT TTCAGATGAT TCGTGAGCTT GGACTTAAGA TACAGGTTGT TATGTCCTTC CACGAATGTG GAGGCAATGT TGGAGATGAT GTGCATATAC AAATCCCTGA GTGGGTTAGA GAAGTTGGTC AAAGCAATCC TGACATATAC TTCACTGACA GAGCAGGCAG GCGTAACACT GAATGCCTTA CTTGGGGAAT TGACAAGCAA CGGGTTTTAA GAGGACGAAC TGCTCTGGAG GTTTACTTTG ATTACATGCG AAGCTTTCGG GTGGAATTTG ATGAATTCTT TGAGGATAAA ATCATCCCTG AAATTGAAGT TGGACTAGGT CCATGTGGGG AGCTGAGGTA TCCTTCATAC CCTGCACAAT TTGGGTGGAA ATATCCTGGT ATTGGTGAAT TTCAGTGTTA TGATAAATAT TTGATGAAGA GCCTAAAGGA GGCTGCAGAA GTAAGAGGCC ACAGCTTTTG GGGCAGAGGA CCTGATAACA CAGAGACTTA TAATTCAACA CCACATGGGA CCGGATTTTT TCGCGATGGA GGCGATTATG ACAGCTACTA TGGTAGATTC TTTCTTAATT GGTACTCAAG AGTTCTGATT GACCATGGTG ATCGTGTTCT TGCTATGGCA AATTTGGCTT TCGAAGGAAC TTGCATCGCT GCAAAGCTCT CAGGTATACA CTGGTGGTAT AAAACAGCTA GTCATGCTGC TGAACTCACT GCTGGCTTCT ACAACTCCTC AAACCGTGAT GGCTATGGTC CAATAGCTGC AATGTTCAAG AAACATGATG CTGCTCTCAA TTTCACATGT GTGGAGTTAC GGACACTTGA TCAACATGAG GATTTTCCAG AGGCTCTGGC AGATCCAGAA GGCCTAGTTT GGCAGGTGCT GAATGCTGCT TGGGATGCTA GTATACCTGT TGCTAGTGAA AATGCTCTTC CTTGTTATGA TAGAGAAGGT TACAACAAGA TACTTGAAAA CGCAAAGCCC CTTACCGATC CTGATGGTCG CCACCTTTCA TGTTTCACTT ACCTGAGGCT TAACCCAACT CTGATGGAGT CTCAAAACTT CAAAGAGTTT GAGAGATTCG TCAAACGAAT GCATGGTGAA GCCGTTCCTG ATCTTGGTTT GGCTCCAGGG ACACAAGAGA CCAACCCCGA GTGAACATAT TAGTACCTTC ATTAGATCCA TGCTACTAAA AACACTCATT AGTACCTGGT TATAATAAGA ACGTTTTGGC TTGGCTTTAC CAATTAAGCG TAGCCATGTT GAATAAATTC AAAACCAAGA TTGTAAAATT AGCTTGTAAA ATGAACAGTG TATATAACAA TATAAGTGTT ATGTCCATTG ATATTTCAGA AGAAATTGCT AGCAACATTA CAGGCT 
Length1876
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23249758.. 23252423
Download Sequence
A.thaliana
AGI-codeAT4G00490.1
Descriptionbeta-amylase 2
TAIR curator summaryEncodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Alias[BAM2][BMY9][beta-amylase 2][BETA-AMYLASE 9]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg482567 NDR1/HIN1-like 12
14.4222 Ahg481880 phosphate transporter 4;1
15.2315 Ahg939440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
17.1464 Ahg482590
21.2132 Ahg493880 ribosomal protein large subunit 27
22.5832 Ahg487706 Small GTP-binding protein
24.96 Ahg940367 NAD(P)H dehydrogenase C1
26.8328 Ahg491801 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
29.5973 Ahg928878 Thioredoxin superfamily protein
30.1993 Ahg494873 Aldolase-type TIM barrel family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression