| Annotation |
|---|
| Description | jgi|Araly1|913525|Al_scaffold_0001_3779 |
| Sequence |
ATGAAGCAAC TCTGGGCTTT GTTGTTCTTG TCTTGCCTTT GTACTGGATT GTTCACAAAA GCACATTCTG AGAAACCAAA AGTTGTGAAA ATCGGTTCTA TATTCAGTTT TGATTCAGTG ATCGGCAAAG TTGCTAAGAT TGCTATTGAT GAGGCAGTGA AAGATGTGAA TTCAAACCCA GACATTCTCA GAGGAACAAA GCTTTCTGTT TCGATGCAAA ACTCTAATTG CAGCGGTTTT ATGGGCATGG TTGAAGCATT GCGGTTTATG GAGAAGGATA TAGTTGGGAT TATAGGACCA CAATGTTCTG TAGTTGCTCA TATGATATCT CATATGGCAA ACGAACTTCA TGTGCCTCTT CTTTCGTTTG CTGTTACGGA TCCTGTAATG TCGCCGTTAC AGTTTCCGTA TTTTATTAGG ACGACTCAGA GCGATTTATA TCAGATGGAT GCTATTGCTT CTATTGTTGA TTTCTATGGT TGGAAAGAAG TAATTGCTGT GTTTGTGGAT GATGATTTCG GAAGGAATGG TGTGGCTGCG TTGAACGATA AGCTTGCGAG TAGGAGATTG AGAATTACTT ATAAGGCTGG TTTACATCCC GATACCGCTG TGGATAAGAA CGAGATCATG AACATGCTAA TCAAGATCAT GTTGCTTCAG CCGAGGATTA TTGTGATACA TGTTTACTCG GAATTGGGTT TTGCGGTTTT TAAGGAGGCT AAGTATCTTG GAATGATGGG AAATGGGTAT GTTTGGATCG CTACGGATTG GCTCTCCACG AATCTTGACT CTTCCTCTCT GCTACCCGCT GAGCGATTGG AAACTATTCA AGGTGTTCTT GTTTTGCGTC CGCACACGCC TGATTCTAGT TTGAAACGGG AGTTTTTCAA GAGGTGGCGT AAGGTTTCCG GTGCTTCTTT GGCTCTTAAC ACATATGCTC TATATGCTTA TGATTCTGTT ATGCTTTTAG CGCGTGGTTT AGATAAGTTC TTCAAAGACG GTGGGAAAAT ATCGTTTTCT AATCACTCAA TGCTTAATAC TCTGGGAAAG AGCGGAAATC TCAATCTCGA AGCAATGACC GTCTTTGATG GTGGAGAAAC TCTGCTTAAG GATATCCTCG GAACGCGTAT GGTTGGTTTA ACAGGACAGC TTCAGTTCAC TCCGGACAGG TCTCGGACCC GTCCAGCTTA TGATATTATC AATGTGGCCG GAACCGGTGT TCGCCAAATA GGCTACTGGT CAAATCATTC TGGTTTATCA ACCGTATCAC CCGAGTCACT CTATACAAAG GAGCAACCAA ATATGTCTTC TGGTACAACA AGTCCGAAAC TAAGGCATGT GATTTGGCCG GGAGAAACAT TTACAAAACC TCGCGGATGG GTTTTCTCTA ACAATGGTAA AGAACTCAAG ATTGGCGTGC CTCGCCGCGT CAGTTACAAG GAGTTTGTAT CACAAATTCG TGGAACCGAG AATATATTCA AAGGGTTCTG CATTGATGTC TTCACAGCTG CAGTGAACCT TTTACCTTAC GCAGTCCCTG TCAAGTTTAT TCCTTATGGA AACGGAAAGG AGAATCCGAG CTACACGCAT ATGGTTGAGA TGATAACAAC TGGTAATTTT GATGGGGTAG TAGGTGATGT TGCCATTGTA ACAAACCGGA CAAAGATTGT AGATTTCACA CAACCGTATG CAGCATCTGG ACTAGTTGTT GTTGCTCCTT TTAAAAAACT GAATTCAGGA GCTTGGGCTT TTCTTCGACC TTTCAATCGA CTTATGTGGG CAGTCACGGG TTGTTGTTTT CTCTTTGTTG GCATTGTTGT TTGGATCTTG GAACATAGGA CTAACGATGA ATTCAGAGGC CCGCCGAAGA GACAATGCGT CACAATTCTT TGGTTTAGCT TCTCGACCAT GTTTTTCGCG CATAGAGAGA ACACAGTTAG TACACTTGGG CGGTTGGTTC TGATCATATG GCTATTCGTT GTACTAATTA TCAACTCGAG CTACACGGCT AGTCTGACAT CGATTCTGAC GGTTCAGCAG CTCTCATCCC CCATCAAGGG AATTGAAAGC CTTAGAGAAA GGGATGATCC GATCGGGTAC CAGGTGGGTT CGTTTGCAGA GAGTTATTTG AGGAATGAAC TTAACATATC AGAGTCACGG CTCGTCCCAC TTGGAACACC TGAAGCCTAT GCCAAGGCTT TAAAAGATGG ACCAAGCAAA GGAGGTGTTG CTGCAGTTGT TGACGAGCGT CCCTATATAG AACTCTTCCT CTCCAGCAAC TGCGCCTATA GGATCGTCGG TCAGGAGTTC ACCAAAAGCG GCTGGGGATT TGCATTTCCT AGAGACTCTC CTCTTGCAAT AGATCTATCA ACAGCGATCT TAGAGCTGGC AGAAAACGGA GATTTGCAGA GGATCCACGA CAAATGGCTA ATGAAGAACG CATGCTCTCT GGAGAATGCG GAGCTTGAAT CAGACAGGCT TCACCTAAAG AGCTTCTGGG GACTGTTTCT CATATGCGGT GTTGCGTGCC TCCTCGCTCT CTTCCTATAC TTTGTTCAGA TCATCCGTCA GCTCTATAAA AAGCCAAGCG ATGATGCCAT TGCAAGAGAT CAGCAGCAGA ATCATGTCTC CTCCTCCATG CGTTCCACTC GTCTGCAAAG ATTCTTGTCC CTCATGGATG AGAAAGAAGA GTCCAAGCCC GGAAGCAAGA AGAGAAAGAT CGATGGATCA ATGAACGATG CTTCAGCAGG ATCGACACGA TCACGAGGAT TCGACAGAGA AAGAAGCCTC AATTCGGTAA ACCCATTAGA TTGA |
| Length | 2814 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 20695721.. 20698981 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G42540.1 |
| Description | glutamate receptor 3.3 |
| TAIR curator summary | member of Putative ligand-gated ion channel subunit family |
| Alias | [ATGLR3.3][GLR3.3][glutamate receptor 3.3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.60555 |
Ahg942945 | SPA1-related 2 |
| 6.16441 |
Ahg483529 | Ankyrin repeat family protein |
| 9.16515 |
Ahg930446 | RNA recognition motif (RRM)-containing protein |
| 10.7238 |
Ahg490595 | Patched family protein |
| 13.0384 |
Ahg472939 | squamosa promoter binding protein-like 10 |
| 26.1534 |
Ahg489136 | magnesium (Mg) transporter 10 |
| 28.3725 |
Ahg489770 | Drug/metabolite transporter superfamily protein |
| 28.3901 |
Ahg311357 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 29.6648 |
Ahg496010 | FTSH protease 9 |
| 31.1127 |
Ahg929326 | SPA1-related 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|