Detail



ID : Ahg350602

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350602|fgenesh1_pg.C_scaffold_6001195
Sequence
ATGGAGCCAT CTCAAGGCAA CACTAAAACG CCGTCGTTTC CAGATTCCAC TATCCCTGTG GATTCCGATG GCCGAGCCAC CGTCTTCCGA CCATTTTCTC TCTCCTCGCC GCACTCACGA GCCTTTCACC TAGCGTGGCT CTCACTCTTC TCATGCTTCT TCTCTACCTT CTCCATCCCT CCACTCGTCC CCGTCATCTC CTCCGACCTC AACCTCTCTG CCTCCACCGT ATCCGCCGCC GGAATCGCCT CCTTCGCTGG CTCTATCTTC TCTCGCCTCG CTATGGGACC ACTCTGTGAT CTCATCGGAC CACGGACTTC CTCAGCGATT CTCTCTTTCC TCACCGCTCC TGTAATCCTC TCCGCCTCAC TCGTCTCCTC CCCGACGTCC TTCATACTCG TCCGTTTCTT CGTCGGCTTC TCTCTCGCTA ATTTCGTAGC TAATCAATAC TGGATGTCCT CCATGTTCTC TGGCAACGTC ATTGGTCTCG CTAACGGTGT CTCAGCCGGT TGGGCTAACG TCGGCGCCGG TATCTCTCAG CTACTTATGC CTCTCATATA CGCAACCATC GCCGAATTCT CCCCACGCTC CATCGCCTGG CGCGTGTCAT TCGTCTTTCC CGCCATTTTT CAGGTTACAA CCGCCGTCCT CGTTCTCCTC TACGGCCAAG ATACTCCCAA CGGTAACAGA AAAAACTCGA ACCAGAACAA AATCATAAAT CCTGAAGAAG AAGTATTAGT AGTACAAGGA GAAGAAGAAC GTTCCAGTTT TGTCGAGATC CTTATCGGCG GACTTGGAAA TTACAGAGCG TGGATCCTGG CGCTTCTCTA CGGATACTCG TACGGCGTTG AGCTCACGAC GGACAACGTT ATCGCCGGAT ATTTCTACGA GAGATTCGGC GTGAATTTAG AGGCAGCGGG GACGATCGCG GCGAGTTTCG GGATATCGAA CATAGCGTCG CGACCGGCGG GAGGGATGAT ATCGGACGCG CTGGGAAAAA GATTCGGGAT GAGAGGGAGG CTCTGGGGAC TGTGGGTGGT GCAATCGGTG GCTGGGTTGT TGTGCGTGTT ACTCGGACGA GTCAACTCGC TCTGGGGATC AATCGCCGTC ATGTGGGTCT TCTCTGTTTT TGTTCAAGCT GCTTCTGGCC TCGTATTTGG CGTGGTCCCT TTCGTCTCCA CGAGATCTTT AGGAGTCGTG GCGGGAATTA CGGGAAGCGG CGGCACTGTA GGTGCGGTGG TCACGCAGTT TCTGTTGTTT TCCGGCGATG GTGTTCGAAA ACAGAGAAGC ATTTCACTTA TGGGTTTGAT GACTTTTGTG TTTTCTCTGT CTGTTACATC TATTTACTTT CCACAATGGG GTGGAATGTG TTGTGGGCCT TCCGAAGAAG AAGATTTATC TCGGCGACTC CTTGTAGAAG ACGAAGAGGA AGACGATAAA GTGACTAGTG GTAGACTACG TCCCGTTTGT TGA 
Length1473
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5658109.. 5659664
Download Sequence
A.thaliana
AGI-codeAT5G14570.1
Descriptionhigh affinity nitrate transporter 2.7
TAIR curator summaryEncodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.
Alias[ATNRT2.7][NRT2.7][high affinity nitrate transporter 2.7]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg482070 salt tolerance homologue
4.47214 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
6.63325 Ahg495863 CONSTANS-like 5
6.85565 Ahg947925 HXXXD-type acyl-transferase family protein
6.9282 Ahg932059 B-box zinc finger family protein
7.07107 Ahg490053 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
7.14143 Ahg488447 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
8 Ahg331043 zinc knuckle (CCHC-type) family protein
8.94427 Ahg326806 Integrase-type DNA-binding superfamily protein
10.247 Ahg491430 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression