Detail



ID : Ahg494670

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494670|fgenesh2_kg.8__486__AT5G43330.1
Sequence
TAATAAATAA ACACACAGGT CTGCTTCACA CTGATCATCA ATCACGATCT CTTCTATTTT ATTCACCGGC GATAATTTTC CGATCTCGAT TAAGATGGCG AAGGAACCAG TCCGTGTTCT TGTTACCGGA GCTGCAGGAC AAATCGGATA TGCTCTTGTT CCTATGATTG CAAGGGGGAT AATGCTTGGT GCAGACCAGC CTGTGATCCT CCACATGCTT GATATCCCTC CGGCAGCAGA AGCTTTGAAC GGTGTGAAAA TGGAGTTGAT CGATGCTGCT TTCCCTCTTC TGAAAGGTGT GGTGGCTACA ACTGATGCCG TTGAAGGATG TACCGGTGTT AATGTTGCTG TCATGGTTGG CGGTTTCCCG AGGAAGGAAG GAATGGAGAG GAAGGATGTT ATGTCGAAGA ACGTTTCCAT TTACAAGTCT CAAGCTGCTG CCTTGGAGAA GCATGCCGCA CCAAACTGCA AGGTTCTGGT TGTTGCAAAC CCTGCAAACA CCAATGCATT GATCCTGAAG GAATTTGCAC CATCGATCCC AGAGAAGAAC ATTACTTGCT TGACCAGGCT TGACCACAAC AGGGCATTGG GACAAGTCTC TGAGAGGTTA AGCGTACCAG TGTCTGATGT CAAGAACGTG ATTATCTGGG GAAACCACTC ATCAACCCAA TACCCAGATG TCAACCATGC TACCGTTAAG ACTTCCTCTG GAGAGAAGCC AGTGCGTGAG CTAGTCAAGA ATGACGAGTG GTTGAATGGA GAGTTCATCT CTACCGTTCA ACAACGTGGA GCTGCCATTA TCAAGGCCAG GAAACTGTCT AGTGCACTCT CTGCAGCTAG CTCTGCTTGT GACCATATCC GTGATTGGGT CGTTGGAACA CCCGAGGGCA CATTTGTTTC AATGGGAGTA TACTCAGATG GATCCTACAA TGTTCCAGCT GGACTTATCT ACTCTTTCCC CGTAACCTGC CGTAATGGAG AGTGGACTAT TGTTCAAGGT TTACCGATCG ATGAAGTATC AAGGAAGAAG ATGGATTTGA CAGCAGAGGA GTTGAAGGAA GAGAAGGACC TCGCTTACTC ATGCCTCTCT TAAACCGGTT TTTCTCAGCC GGTTTAATCA GTGAGAGCTT TGTTTTGAAT AAAAAAGTTT GCTATAAAGA ACTTTTAATA AACCTCTTGA GCTTGAGGTT TAGTTTTCCT AATTTTCGTT GTGTCAGTGC TGATTTGCTG ACCATATAAA CAGTCATATT GATAATTGA 
Length1259
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4174743.. 4176857
Download Sequence
A.thaliana
AGI-codeAT5G43330.1
DescriptionLactate/malate dehydrogenase family protein
TAIR curator summary
Alias[c-NAD-MDH2][cytosolic-NAD-dependent malate dehydrogenase 2]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg313871 Protein kinase superfamily protein
6.63325 Ahg488410 reversibly glycosylated polypeptide 2
8.12404 Ahg928150 regulatory particle triple-A ATPase 5A
8.24621 Ahg477251 Pre-mRNA-processing-splicing factor
8.94427 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
9.48683 Ahg947400 NADH-ubiquinone dehydrogenase, mitochondrial, putative
9.64365 Ahg943755 Transducin/WD40 repeat-like superfamily protein
9.79796 Ahg489749 stromal ascorbate peroxidase
14.7309 Ahg487463 ABC-2 type transporter family protein
15.2971 Ahg470466 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression