Detail



ID : Ahg495534

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495534|fgenesh2_kg.8__1350__AT5G54540.1
Sequence
ATCATGGGAG GAGGAAGAGC TATGGCGACG GCAGCGAAGG TTGCTGGAAT CGGAGTTGCT AAAGGAGGAT TCAGGGGAGG ATTTGGATTT CCTCCGGCGA CTGAGCAGTT TCGGGTTAAA ACCGCGGCGG CGGCGGCGTC TAAACCGGTT TCGGCTTCGA TTTCATCGGC GGTTCATCCT TCTGTTGAAG AAGATGGGAT GATTATGCAG AGACCGGTTT GGGATGATTG GGAATTTGCT GAAGAAGAGC CAATTCCTAG AGTTGTTTTT AGCAAACCTC CTAGTCTTGA AGAGGCTAAA GAAGCTACTG AGGATCTGAA AGAAGCAATT AATATGGTGT ATATGTCATC TCCAAAGTCG TCTGCTGCTA TGGAAGGATC AAATGATGGT GGTGCTGTTT CCAAAATGCT CTCAGGTTTT CAATCTTCTG AGAACAGAGC TGTTGAATCA GCTGTTCCAC AAGTTGCTCT TCAAGCATTT GCTTTTCTGA GTGAAAACAC CGCTGCACAG ACTGTTGTTG CTTCCATTGC GTGTGACCCA AAAGTATGGG ATGCTGTTAT GGAGAATAAG GATCTCATGA AATTTCTCCA GACCAATAAT ACTGCTGCTT CCTCTCAAGT TGAATCTGAC AATGACGACC AATCTGAACG TTCGAGCACG ACGGAGTGTG AAGTCATGGA AACTAAGCCG ATGGAACTCT TAGAGATTCT GCAGGACATG AAGCTAAAAG CTGTTCGATT GATGGAAAAT GTCTCTTCTT ACTTTGGGGA CTTGTTTGGG TTAGGATCAG TTACAGAGGA TGGGAAAGAC AAGAAGCAGA CGTTGTTCAA CGACCCTCGT TCTCTGTTTG GATTAGCTGT GGTTGTCATC TTCATGGTAG TTTTAAAACG TGCTTAAGGT CTCTTGTTCC TGAATTCGCC GATATAGCGG AAAAACAACT ACGTACTTTG TGATCTCATT CCTTTGCTTT CTTATCGTTT AAACTCTGTT TTTTGTTTAA TTGGAATGGT TTGGAACCGT CTCTGGATCT TTTCATATTA TAAAAATAAA AAGATCCTTT GGATGTTTTA TC 
Length1072
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15594413.. 15595883
Download Sequence
A.thaliana
AGI-codeAT5G54540.1
DescriptionUncharacterised conserved protein (UCP012943)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg891774
5.19615 Ahg316186 Sec14p-like phosphatidylinositol transfer family protein
5.65685 Ahg496456 SPFH/Band 7/PHB domain-containing membrane-associated protein family
6.7082 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
6.9282 Ahg491819 protein kinase family protein / WD-40 repeat family protein
7.48331 Ahg924165 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
8.83176 Ahg495912 SNARE-like superfamily protein
10.583 Ahg474234 A20/AN1-like zinc finger family protein
12.8452 Ahg470417 cryptochrome 2
15.2971 Ahg935788 sister-chromatid cohesion protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression