Detail



ID : Ahg496600

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496600|fgenesh2_kg.8__2416__AT5G64050.1
Sequence
AGTTATGAGG CTTTAATCGA ATTTATTGCT TTTGCTTTGC TTTGCGACTT TCTTCTTTCC GGATAATCAA ATCCTTTTAT CCTCTGAAAA ATCTCAACTT TCGAAGAAAA AACGCAAAAT GGCGAGCCTT GTCTACGGGA CGCCGTGGCT TAGGATTAGG TCTTTACCGG AGCTTGCTCC AGCTTTTCTC AGACGTCGTC AATCTTCTTT ATTTTATTGT TCTCGGCGAA GCTTCGCGGT GGTTGCGTGT TCTTCACCAG TTAGTACTGG TGGGTCTGTT AGAGTTCGTT TCGCGCCTTC TCCCACTGGT AATCTCCATG TAGGTGGAGC AAGGACTGCT CTTTTCAACT ACTTGTTCGC GAGGTCTAAA GGAGGGAAAT TTGTGCTGAG AATTGAAGAT ACGGATTTGG AGAGATCAAC ACGTGAATCT GAAGCAGCTG TTCTTCAGGA TCTCTCATGG CTGGGTCTTG ATTGGGATGA AGGTCCTGGG GTTAGTGGAG ACTTTGGTCC TTATCGACAA TCCGAAAGAA ATGCTTTGTA CAAACAATAT GCAGAGAAGC TTTTAGAGTC AGGTCATGTC TATCGATGCT TTTGCTCCAG TGAGGAACTT GTAAAGATGA AGGAGATTGC AAAGTTGAAA CAGTTGCCTC CAGTATATAC CGGGAAATGG GCAACAGCTT CTGATTCTGA AATAGAGCAA GAGTTAGAAA AGGGAACACC TTTTACTTAC CGGTTTCGTG TGCCAAAGGA AGGCTCTTTG AAAATTAATG ACCTGATTCG TGGCGAGGTA TGTTGGAACT TGGATACTCT TGGAGATTTT GTGGTAATGA GGAGTAATGG CCAACCTGTT TACAACTTTT GTGTTACGGT AGATGATGCT ACCATGGCTA TATCACATGT TATAAGGGCT GAAGAACACT TACCTAATAC TTTGAGGCAG GCTCTAATTT ACAAGGCTCT GGAGTTCCCG ATGCCTCAGT TTGCACATGT TTCTTTAATT CTAGCTCCGG ATAGAAGTAA ACTGTCAAAG CGACATGGGG CAACTTCTGT AGGCCAGTAC AGAGAGATGG GATATCTACC TCAGGGAATG GTTAACTATT TGGCACTCTT AGGTTGGGGA GATGGGACTG AAAATGAATT CTTCACACTC GAGGAACTTG TTGAAAAATT CTCGATCGAA CGTGTCAACA AAAGTGGTGC GATTTTTGAT TCAACAAAGT TAAGATGGAT GAATGGTCAA CATCTGAGGG CACTTCCAAA GGAAAAACTA ACAAAACTTG TTGGTGAGCG ATGGAAGAGT GCCGGTATCT TAACAGAATC CGAGGGGAGT TTTGTAGATG AAGCAGTCGA GCTTCTCAAG GATGGGATTG AGTTGGTGAC AGATTCAGAC AAAGTACTTT TGAACTTGCT TTCATATCCT CTACACGCTA CATTGGCTAG CCCTGAAGCT AAGCCTGCCG TGGAAGACAA ACTTCATGAA GTAGCAGCCA GCCTCATAGC TGCTTATGAC AGCGGTGAGA TTCCAAGCGC TTTAGAAGAA GGACAAGGTG CTTGGCAGAA ATGGGTGAAA GCCTTTGGCA AATCATTGAA ACGCAAAGGT AAATCACTTT TCATGCCACT ACGAGTGTTG TTAACGGGAA AACTCCATGG TCCTGAGATG GGCACCAGTA TTGTTCTGAT TCACAAAGCT GGAAGTCCCG GTATAGTGGT TCCTCAGGCT GGGTTTGTAT CCATGGAGGA ACGGTTTAAA ATTCTCAGGG AGATAGACTG GGAAGCTTTG AACAAAGATG AGAGTGTGCC TCTTGAATCT ACAGCCACAG TATCAACCTG AGAGAACTCC CCTTTTCTAT TTTTCTTCAG TTTTCGGTTA GTTGGTGAGA AAGACAGCCC AGAGATTTTG ATTCCTCGTG CATTTCTTGT TTCCCGAAAC AAATGGCACA ACGAAATTTG TAGATTATAA TGTATCAGCA AAGGAACAAA CCAGAGTGCT TGTAACATTA TCAGGC 
Length2006
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20009317.. 20012587
Download Sequence
A.thaliana
AGI-codeAT5G64050.1
Descriptionglutamate tRNA synthetase
TAIR curator summaryGlutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.
Alias[ATERS][ERS][OVA3][glutamate tRNA synthetase][OVULE ABORTION 3]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg491679 FAD/NAD(P)-binding oxidoreductase family protein
7.93725 Ahg327775 histone deacetylase 1
11.9164 Ahg482072 genomes uncoupled 1
19.5192 Ahg496955 gamma carbonic anhydrase 3
19.9499 Ahg485334
20.9045 Ahg478800 Dihydrolipoamide acetyltransferase, long form protein
20.9762 Ahg929571 lipoamide dehydrogenase 2
22.6274 Ahg925444 ribosomal protein S8
22.6274 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
23.6643 Ahg337119 ARP protein (REF)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression