Detail


ID : Ahg904201

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904201|Al_scaffold_0003_1329
Sequence
ATGAATAGTG GTGATACCTT ATCGACGTTA GCTCAATTTA TCTCCTCTTC CGAGAGATTT TTCCGGCGAG CTGACGGGTA TGGAGGCTTT TGTTATTGCT GGGCCACCGT GTTCGCACTT GTCTTCATTC TTTTCTACCA ATTCGTCCTT TCCCCAAAAC TCCGATTCTT CAGTCATGCT TCTTCTTCTT CTTCTTCCCC TGTTGTCTCG GTTTCTCAAT CTCTGAGCTC CCAATCAAGA ATATCTACTA CACTTGTTTC TGATGAAGAT CTAAAGGGTC TGTTTGAAAA ATTGGAGGAA ACAAGTGAGG ATGCTCAGAT ATGGGAAAAT GTTATTCAGA AAAGCAACCC TCGCGTCTCA TACACTGCTA AATGCTGCAA ACCAACAGAT GGTGGTCCCA TGAAGTATTT GAGTACTACA GTGTTTGAGG ATTGCTCGCC AGAGGTTTTG AGGGACTTTT ACATGGACAA TGAATACAGG AAACAATGGG ATAAAACTGT CGTTGAGCAT GAGCAGTTGC AGGTTGACAG TAATAGTGGA ATCGAGATTG GTCGCACTAT AAAAAAGTTT CCCTTGTTAA CACCAAGGGA GTATGTATTA GCGTGGAAAT TGTGGGAGGG GAAGGATAAG TTTTACTGTT TCATCAAGGA ATGTGATCAC AATATGGTGC CGCAACAGAG GAAGTATGTA CGTGTAAGTT ATTTCAGATC TGGTTGGCGA ATTAGGAAAG GCAAGAACGC TTGTGAGATA CACATGTTTC ACCAGGAAGA TGCGGGATTA AATGTTGAGA TGGCAAAGCT TGCTTTCTCT AGAGGCATAT GGAGTTACGT TTGTAAGATG GAAAATGCAC TTCGTAAGTA CATTGCAACC AGTCATAGAC CCCAAGGGCC CACTTTATCT GCTGTAAGCT TAATGAAGAA GTGCTTGAAA GCTTCTGCCC TGCAATATCT GTTTGTAAAA TCTCAATTTG GTTTTCTGAA ACTGAATATG CCTTCTTTGG CATCACACCC TTGTGTTATC CCACAGATTC CATCAGAGTT AGAAAGTCAG ACAGATGACA TCACAAACTC CTTGGGAACT ACTACTAGTG GTCTGCACAC AGGTGAAGGA GCCAAACGGA AGAAACTGTT GAGAAAGCCT TCAAAGAAAC TGATAGCAAA TGGTATGTTA CTTTTGGGCG GTGCAGTTGG TGGTGCAATC TGCCTGTCTC GTGGTCACTC CGCCTTGGGA GCAAAGGTCG CCTTGGCCTA CTTCTTGTCG AAGATGAGAA AACGTGGAGC TCCACTGAGT CAAACAACCC AAAACGCTGT ATCGGCTCTT AATGACGCTT ATAAGAGCAT GAACTCTCCA TCAAAACTTA AAGGATGGTC TTCAAGCGGA GGCGATCCTT GTGGTGATTC ATGGGATGGC ATTACATGCA AAGGCTCTTC TGTTACTGAA ATAAAAGTAT CGGGACGTGG ACTCAGTGGA TCTTTAGGTT ACCAGCTTGG AAACTTGAAA TCACTCACTT ACCTTGATGT AAGCAAGAAC AATCTTAACG GAAACTTACC CTACCAGCTT CCTGACAAGC TTACTTATCT AGATGGCTCT GAGAATGACT TCAACGGTAA TGTGCCATAC TCGGTATCTC TCATGAATGA TCTCAGTTAC CTAAACCTTG GCCGTAACAA CCTCAATGGT GAACTCAGCG ACATGTTTCA AAAGCTTCCA AAACTTGAAA CAATTGATCT GTCTTCCAAT CAACTCACGG GAAAACTACC GCAGAGTTTT GCCAATCTAA CAGGCCTTAA AACACTGCAC TTGCAAGAAA ACCAATTCAA AGGCTCTATA AATGCTCTCA GGGACCTCCC TCAGATTGAT GATGTAAACG TCGCAAACAA TCAATTTACT GGTTGGATCC CAAACGAGTT GAAGAACATT GGAAACCTTG AAACTGGAGG AAACAAGTGG TCAAGCGGTA GAGCTCCTTC ACCACCTCCC GGAACCCGTC ACATAGACAG AAACTCATCG GGAGGCGGTG GAGGAAGCAG CAAGGCTCTG ACACTTGGAG TTATAATAGC AGTTTCTTGT ATAGGTGGAC TCATTTTATT TGCAGGAGTG ATTGCATTGT TTTCTCGAAG AAAGAACTCT CATCATTCTT CTCACTTTTT CGACGAAGAG AAAGGATCCA ACCGAAACAA GCCACTCTTC ACACCACAAT CCTCTCAGAT GCTTCAATTC GATAATATGG AAGAATTCAA AGGCCAGAAG ACAGTTGATT CTAATACTTC ACTTGAAACA AAGCCTTCTG TTAAAAGAAC TTCTTCTGTC AGTTTCAAGA ACTCTCCTAC TTTTCATCTC ATACCTTCTA CGCAAGTGGC TGCAACCCCT GATCATTCCT CCACCCCCGA AAACTCTCCT GATACACGCG GTGTGAAGGT GTTTTCACTA ACGGATTTGC AGAATTCCGC GTCTTGTTTC TCTCCGAATC GCCTTCTTGG TGAAGGAACC ATTGGACGTG TTTATAAAGC TAAATTTCAA GATGGAAGGA AATATGCAGT CAAAGAGATT GATTCTTCAC TGTTAGGAAA AGGAAATCCG GAAGAGTTTT CACACATAGT GTCGAGTATC TCGAGTATTC ACCACAAGAA TATGGCAGAA CTCGTGGGTT ATTGTTCAGA ACAAGGAAGG AATATGCTTG TTTATGAGTA TTTCACAAGT GGATCACTTC ACAGATTTCT TCACCTGTCT GATGATTTCA GCAAACCATT AACGTGGAAC ACCAGAGTCC GAATCGCTCT TGGAACTGCT CAAGCTATAG AGTACCTTCA TGAAACATGT TCGCCTCCGC TAGTTCACAA GAACATCAAG TCATCGAACA TTTTACTCGA CAATGAGCTA AATCCCCGCC TCTCAGACTA TGGCTTGGCA AACTTTCACC ACCGCACAAG TCAGAATCTT GGAGTTGGAT ACAATGCCCC GGAATGCACA GATCCCTCGG CTTACACACA AAAGAGCGAC GTATACAGCT TTGGTGTGGT GATGCTTGAG CTGCTAACTG GTCGAACGCC TTATGACAGT GAGAGGCCAA AAGCAGAACA GTCTTTAGTT CGTTGGGCAA AGCCGCAGCT TAAAGACATG GATACTCTGG ATGAAATGGT GGATCCCGCG TTGTGCGGAC TCTACGCTCC AGAATCTGTA TCATCATTCG CGGATATAGT TTCCATCTGC GTAATGACGG AGCCTGGACT TCGGCCTCCA GTGTCAAATG TGGTGGAGGC ATTGAAGAGG CTAGTGTAG
Length3279
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4972979.. 4978945
Download Sequence
A.thaliana
AGI-codeAT3G13065.1
DescriptionSTRUBBELIG-receptor family 4
TAIR curator summary
Alias[SRF4][STRUBBELIG-receptor family 4]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg491066 ACT-like protein tyrosine kinase family protein
6 Ahg479158 acyl-activating enzyme 7
15.748 Ahg473866 Granulin repeat cysteine protease family protein
21.166 Ahg941688
21.3542 Ahg489422 Tetratricopeptide repeat (TPR)-like superfamily protein
22.6274 Ahg474909 AMP-dependent synthetase and ligase family protein
23.5584 Ahg480112
32.7261 Ahg941394 beta-amylase 3
40.0749 Ahg935759 Adenine nucleotide alpha hydrolases-like superfamily protein
40.2492 Ahg333664 homolog of yeast autophagy 18 (ATG18) G
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression