| Annotation |
|---|
| Description | jgi|Araly1|483843|fgenesh2_kg.4__2903__AT2G46790.1 |
| Sequence |
AAACTAAAGA GTTTCTTTTT CTTCTTCCTT CTTCTTTACT TCAACATCTC ATATTTTCTC TCTCTCGATT AAGATCTAAA GTGTGATTTT GTTTGTTTTG AGCTCTGAAT CTATGGGGGA GATTGTGGTA TTAAGTAGTG ATGATGGTAT GGAGACGATA AAGAACAGAG TAAAGTCATC GGAAGTTGTT CAGTGGGAGA AGTATTTGCC TAAAACTGTG CTTAGGGTTT TGTTGGTTGA ATCTGATTAC TCAACTCGTC AAATCATCAC TGCCCTTCTT CGTAAATGCT GTTACAAAGT TGTAGCTGTT TCTGATGGTT TAGCTGCGTG GGAGGTTCTA AAGGAGAAGT CACATAACAT TGATCTTATA CTAACTGAGC TGGATTTGCC ATCTATATCT GGTTTTGCTC TGCTTGCTTT GGTTATGGAG CATGAAGCTT GCAAGAACAT TCCTGTCATA ATGATGTCTT CGCAAGATTC GATAAAAATG GTGTTGAAGT GTATGCTGAG AGGTGCTGCT GATTATCTAA TCAAACCAAT GAGGAAAAAC GAGTTGAAAA ATCTATGGCA ACATGTGTGG AGAAGACTTA CTTTGCGTGA TGATCCTACT GCTCATGCTC AAAGCTTACC AGGTTCACAG CACAACCTTG AAGATACTGA TGAAACTTGT GAAGATTCCA GATACCATTC TGATCAAGGA AGTGGTGCTC AGGCTATCAG CTACAATGGT CACAATAAGC TAATGGAGAA TGCCAAATCA GTGGATGAAA GAGACGAGTT TAAGGATTCT TTTGATGTGA CAATGGATTT GATTGGTGGA ATTGACAAGC GTCCTGATAG TCTTTATGGA GACGACAGTC GTGACGAGTG TGTTGGTCCT GAGCTTGGAC TTTCTCTGAA AAGATCTTGC TCTGTAAGTT TTGAGAACCA AGATGAAAGC AAGCATCAAA AGCTTAGCCT CTCTGATGCA TCAGCCTTCT CAAGATTTGA GAATAGTAAG CCAGCAGAGA AAGCTGTCGT TGCTTTAGAG GAGAGTAGTT CAGGTGAGCC AAAGACACCA ACCGAATCAC ATGAAAAGTT AAGAAAAGTA AGATCTGATC AAGGAAGCGC CACAACGAGC AGCAACCAGG AGAATATCGG ATCATCAAGC GTAAGCAGAC AATGTGGACA GAACGAGTTA AGCTTCCATA ACCAAGTTCT GAAGCAACAT CTGCAAGATT CCTCTATACC GGTAGAATCA AATCGTGTGA AAGCAGATAG CAAGGAAGTA GAAGTTGGTT CTCAAAGCAC CTGCAACACC AATGAGGGGA TTGGTGGACA AAGCAGTAGC ACAGAGAAAC CAAAGGAAGA AGAAAGTGTG AAACAACGTT GGAGTAGAAG CCAGAGAGAA GCTGCATTGA TGAAGTTCCG GTTGAAGAGG AAAGACCGTT GCTTTGATAA AAAGGTTCGA TACCAGAGCA GGAAGAAGCT AGCAGAACAA CGACCACGAG TGAAAGGCCA GTTCGTGCGA GCCGTGAATT CAGATGCGTC TACTAAATCA TGAAGCTCTC TTTAAGTTTT TCTCTGATTT CTTTTGTTGA TTTTGTATCA GAAACTTATT TAGCTTTGCA ATCTTTAGTG TGCTTTTTTT GTTTTGTATT TGGCTTCTTC TTCTCAGCTA ATATGAGATA TTGGGGCAAC TTTTGTATAT ATGTCTGCAA ATTATCAGGC TAA |
| Length | 1713 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21587605.. 21590060 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G46790.1 |
| Description | pseudo-response regulator 9 |
| TAIR curator summary | Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY. |
| Alias | [APRR9][PRR9][TL1][Arabidopsis pseudo-response regulator 9][pseudo-response regulator 9][TOC1-LIKE PROTEIN 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg496615 | dentin sialophosphoprotein-related |
| 3.16228 |
Ahg945327 | B-box type zinc finger family protein |
| 3.74166 |
Ahg921302 | gigantea protein (GI) |
| 4 |
Ahg928955 | |
| 4.69042 |
Ahg485777 | Regulator of chromosome condensation (RCC1) family protein |
| 4.89898 |
Ahg488447 | stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) |
| 6.48074 |
Ahg470636 | myb domain protein 13 |
| 6.48074 |
Ahg495863 | CONSTANS-like 5 |
| 7.4162 |
Ahg487518 | |
| 9 |
Ahg939656 | pseudo-response regulator 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|