| Annotation |
|---|
| Description | jgi|Araly1|922911|scaffold_104192.1 |
| Sequence |
AAACCAAAAA TATCTCTTTA ATGGCTCAAA CCATGCTGCT TACTTCCGGC GTCACCGCCG GCCAATTCTT GAGGAACAAG AGCCCTTTGG CTCAGCCCAA AGTTCACCAT CTCTTCCTCT CTGGAAACTC TCCGGTTGCT CTACCATCTC GTAGACAATC ATTCGTTCCT CTTGCTCTCT TCAAATCCAA AACCAAAGCT GCTCCCAAAA AGGTTGAGAA GCCGAAGAAA AAGGTTGAGG ATGGGATCTT TGGTACGTCA GGTGGGATAG GTTTCACGAA GGCGAATGAG CTATTCGTGG GCCGTGTCGC TATGATCGGT TTCGCTGCAT CGTTGTTGGG TGAGGCGTTG ACGGGAAAAG GAATATTAGC TCAGCTGAAT CTGGAGACAG GGATACCAAT TTACGAAGCA GAGCCATTGC TTCTCTTCTT CATCTTATTC ACTTTGTTGG GGGCCATTGG AGCTCTCGGA GACAGAGGAC AATTCGTCGA CGATCCTCCC ACCGGACTCG AAAAAGCCGT CATTCCTCCC GGGAAAAGTG TCCGATCTGC CCTCGGTCTC AAAGAACAAG GTCCATTGTT TGGGTTCACA AAGGCGAACG AGCTATTCGT AGGAAGATTG GCACAGCTGG GAATAGCATT TTCACTGATC GGAGAGATTA TAACCGGGAA AGGAGCATTA GCTCAACTCA ACATTGAGAC CGGTATACCA ATTCAAGATA TCGAACCACT CGTCCTCTTA AATGTTGCTT TCTTCTTCTT TGCTGCCATT AATCCTGGTA ATGGAAAATT CATCACCGAT GATGGTGAAG AAAGCTAAAT TATCATGTAC TTAAATTTAG TAGAGTGTGT GACCATCTCT TCATGTTGAG ACAAAAGGAA ATGGACAGCT TAAATTGTTG T |
| Length | 901 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 21723047.. 21724380 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G44575.1 |
| Description | Chlorophyll A-B binding family protein |
| TAIR curator summary | Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation. |
| Alias | [CP22][NPQ4][PSBS][NONPHOTOCHEMICAL QUENCHING 4][PHOTOSYSTEM II SUBUNIT S] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg473747 | glyceraldehyde-3-phosphate dehydrogenase B subunit |
| 3.74166 |
Ahg938526 | sedoheptulose-bisphosphatase |
| 5.19615 |
Ahg490821 | serine transhydroxymethyltransferase 1 |
| 5.65685 |
Ahg486711 | rotamase CYP 4 |
| 6.48074 |
Ahg928039 | Ribose 5-phosphate isomerase, type A protein |
| 6.48074 |
Ahg486816 | chloroplast stem-loop binding protein of 41 kDa |
| 6.7082 |
Ahg478641 | phosphoglycerate kinase 1 |
| 8.7178 |
Ahg475805 | ribulose bisphosphate carboxylase small chain 1A |
| 8.83176 |
Ahg486691 | |
| 9.94987 |
Ahg485801 | high cyclic electron flow 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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