Detail



ID : Ahg924056

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924056|scaffold_105337.1
Sequence
GAACCGAAAG GAAAGAGTCT CACCATGTCT TTAGCTCCGA GCAGTTATCC ATCTCTGTAT TCTTCACCTT CACTGCCAAG AACACAGCAA ACCAAGCAAA GCCCTAGTTT GATCACTCAA TCCAGTTTCA TTTCCGCCAA AAGTCTCTTC CTTTCGAGCA ATTCGAATTC TTTATGTAAT ACCCATGTTG CCAAACGCCG GAATTTAGCT TCGAAGGCGT CGGAGACAGA GTCGACGGCG AAGACTGAAG GAGGAGGAGA AGGAGAAGAA GAAGAGAAGT ATGAAACATA TGAAGTTGAA GTGGAGCAGC CTTATGGTTT GAAATTCAGG AAAGGAAGAG ATGGTGGCAC TTACATTGAT GCTATCTTGC CCGGTGGATC AGCTGACAAA ACCGGGAAAT TCACCGTCGG TGACAGGGTT ATTGCCACAA GTGCAGTGTT TGGGACAGAG ATTTGGCCTG CAGCTGAATA CGGTAGGACA ATGTACACAA TCCGTCAGAG AATTGGTCCC TTGCTTATGC AAATGGAGAA GAGAAATGGT AAGGCTGAAG ATACTGGTGA GTTAACAGAG AAGGAGATAA TAAGAGCTGA GAGGAACGCC GGATACATTA GCAGTAGATT GAGGGAAATT CAGATGCAAA ACTATTTGAG GAAGAAAGAA CAGAAAGCTC AACGGGAGAA AGATCTTCGT GAAGGGCTGC AGTTTTCCAA GAATGGTAAA TATGAGGAAG CATTGGAGAG ATTTGAGTCT GTGTTAGGTT CTAAACCAAC ACCAGAAGAA GCATCAGTTG CAAGTTACAA TGTTGCTTGT TGCTACTCAA AGCTTAATCA GGTTCAAGCT GGTCTCTCGG CTCTGGAAGA AGCATTGAAG TCAGGATATG AAGATTTTAA GAGAATCAGA ACAGATCCAG ACCTGGAAAA TCTTAGGAAG TCGAAGGATT TCGATCCACT CCTGAAGCAA TTCGACGAAT CTTTCATCAA CGAGAGTGCC ATTAACGCCA TCAAGTCCTT GTTTGGCTTT AACAAGAAAT AGTTCACCTA AAGTTTGTGT CTTTTGATGT GATCTGTTCA TAGCTTCTCT TCTCTT 
Length1086
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27868599.. 27870217
Download Sequence
A.thaliana
AGI-codeAT1G55480.1
Descriptionprotein containing PDZ domain, a K-box domain, and a TPR region
TAIR curator summaryEncodes a member of a novel plant protein family containing a PDZ, a K-box, and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding.
Alias[ZKT][protein containing PDZ domain, a K-box domain, and a TPR region]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg491390 glycine decarboxylase P-protein 1
9.27362 Ahg480058
10.4881 Ahg490231 photosynthetic electron transfer C
13.7477 Ahg895551 K+ efflux antiporter 3
14.7986 Ahg486548 Transketolase
15.9687 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
16.3095 Ahg472502
17.4356 Ahg485801 high cyclic electron flow 1
20.7846 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
21.166 Ahg926404 Phosphoglucomutase/phosphomannomutase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression