Detail



ID : Ahg924235

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924235|scaffold_105516.1
Sequence
ACTCATTCTC TAAAAAAAAA ATGGAGACCC TTCTCTCCCC TCGTGCTCTC TCTCCTCCTC TCAACTCCAA ACCCTCTTCC ACTCACCAGA CCAAACCCAC TTCACATTCC TTGTCTCTCT CAAAACCCAC AACCTTCTCC GGTCCTAAAC ACCTCTCCAC CCGGTTTACT AAACCGGAAT CAAGAAACTG GTTAACAGAT GCAAAGCAAG GACTAGCTGC TTTAGCTTTA TCTCTAACTC TCAGTTTCTC ACCTGTTGGC ACTGCTTTAG CTTCTGAGTT CAATATCCTC AACGATGGTC CACCAAAAGA CACTTACGTA GTCGACGATG CTGGTGTTCT AAGTCGAGTG ACGAAGTCAG ATCTTAAAAA TCTTTTGTCT GATCTTGAAT ACAGAAAGAA ACTGAGACTC AATTTCATCA CTGTCCGAAA GCTCACTAGT AAAGCAGATG CGTTTGAGTA TGCAGACCAA GTTTTGGAGA AATGGTATCC TTCAATTGAA GAAGGTAACA ATAAAGGTAT TGTTGTTTTG ATCACAAGTC AGAAGGAAGG AGCTATTACT GGTGGTCCTG CTTTTATTGA AGCTGTTGGT GAAAACATTC TTGATGCTAC CGTCTCCGAA AATCTTCCCG TACTAGCAAC GGACGAAAAA TACAATGAGG CGGTATATAG CAGTGCAAAA TGGTTAGTTG CAGCTATAGA CGGTCTACCA GATCCCGGTG GTCCAACAGT AAAGGATAGC AAGAGAGAAT CAAATTTCAA GACGAAACAA GAAACAGACG AGAAGAGAGG ACAATTCAGT CTTGTCGTTG GAGGATTACT TGTAATTGCC TTTGTAGTTC CCATGGCACA GTACTTTGCT TATGTCTCCA GGAAGTAAGT AAACTCGGTT CACTCTCGTA AACCAAACCG ATCAGGTCAG AACTTTGTTT TACATCGGTT ATTTGGTTAT GGTTTCTTGG TGAATTGGTT TATTTGAGCA AT 
Length982
Protein Sequence
Protein Residue
Map Locationscaffold_1: 29515875.. 29517394
Download Sequence
A.thaliana
AGI-codeAT1G54780.1
Descriptionthylakoid lumen 18.3 kDa protein
TAIR curator summaryEncodes a thylakoid lumen protein regulating photosystem II repair cycle.
Alias[AtTLP18.3][TLP18.3][thylakoid lumen protein 18.3]
Gene coexpression
MR
MR Locus Description
8.544 Ahg483848 photosystem I P subunit
11.5758 Ahg481843 NAD(P)-binding Rossmann-fold superfamily protein
13.6382 Ahg470689 photosystem II subunit P-1
17.3205 Ahg915184 photosystem I subunit l
19.799 Ahg475174 photosystem I light harvesting complex gene 3
20.7846 Ahg483720 Remorin family protein
20.9762 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
21.4942 Ahg471375 Pentapeptide repeat-containing protein
21.9545 Ahg490952 geranylgeranyl pyrophosphate synthase 1
22.2261 Ahg480629 RING-H2 finger A3A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression