| Annotation |
|---|
| Description | jgi|Araly1|490952|fgenesh2_kg.7__385__AT4G36810.1 |
| Sequence |
TCACTAATGG CCAATCCAAT TCTCTATTGA TTTTGACTCC AATTTCCAAA AAAAACAAAT GGCTTCAGTG ACACTAGGTT CATGGATCGT TGTTCACCAC AATCATCATC ATCATCATCA TCATCTTCCT TGTTCAATCT TCACCAAATC CAGATCCAGA TCTTCTTCTT CTTCTTCTCC CATAACTCTT ACTAAACCCA TCTCTCTTCG TTCAAAACGC ACCGTTTCAT CTTCTTCAAT CGAGACTTCT TCTTCCGTTG TTACAAAAGA AGACAATCTC CACAAATCTG AACCATCCTC TTTCGATTTC ATGTCGTACA TCATTACCAA AGCCGAATCA GTCAACAAAG CTTTAGATTC AGCTGTTCCT CTCCGTGAGC CACTCAAGAT CCACGAAGCC ATGCGTTACT CTCTTCTCGC CGGTGGCAAA AGAGTTAGAC CAGTTCTCTG CATCGCCGCT TGTGAACTCG TCGGCGGCGA TGAATCAACC GCTATGCCAG CGGCCTGCGC CGTCGAGATG ATTCACACCA TGTCGTTGAT CCACGACGAT CTACCTTGTA TGGATAACGA CGATCTCCGC CGTGGAAAAC CGACGAACCA CAAAGTGTTC GGTGAAGACG TCGCGGTTTT AGCCGGAGAC GCGCTTCTCT CGTTCGCTTT CGAGCATTTA GCGTCGGCGA CTTCTTCTGA TGTTGTATCT CCGGTGAGAG TGGTTCGAGC CGTTGGAGAA TTGGCTAAAG CAATTGGAAC AGAAGGGTTA GTGGCGGGTC AAGTCGTTGA CATTAGTAGT GAAGGGTTAG ATTTAAACGA CGTCGGTTTA GAGCATTTGG AGTTTATCCA TTTGCATAAA ACGGCGGCGT TGCTTGAAGC CTCTGCGGTT TTGGGAGCGA TCGTTGGTGG AGGAAGTGAT GATGAGATCG AGAGGTTAAG GAAGTTTGCG AGATGTATTG GTTTGTTGTT TCAGGTGGTT GATGATATCT TGGATGTGAC GAAATCGTCG AAAGAGTTAG GGAAAACTGC TGGGAAAGAT TTGATTGCGG ATAAATTGAC GTATCCTAAG ATTATGGGTT TGGAGAAATC GAGAGAGTTT GCTGACAAGT TGAATAGAGA GGCTCGTGAT CAGCTTTTAG GGTTTGATTC TGATAAGGCT GCTCCTTTGT TGGCTTTGGC TAATTACATT GCCTATAGAC AGAACTGATT GTGTTCCGAT TCCTTTTGTC GGGAATCATT AGACTGAAAT TGTAGAAATC TCGGACAGGT TCTAGAGTTT GTTTGTGTAA TCATCTCTAT GTTTCCATGT ACTAAAAAAA ACTGGATAGT AATGGATGCA ATATTAAGAG GTTCATGTGT TTGTAATAGA GTCCCTGGTT GG |
| Length | 1372 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1561446.. 1562851 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G36810.1 |
| Description | geranylgeranyl pyrophosphate synthase 1 |
| TAIR curator summary | Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. |
| Alias | [AtGGPPS11][AtLSU][GGPPS11][GGPS1][LSU][geranyl(geranyl)diphosphate synthase 11][geranylgeranyl pyrophosphate synthase 1][Large subunit of Heterodimeric geranyl(geranyl)diphosphate synthase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.3791 |
Ahg347932 | DNAse I-like superfamily protein |
| 21.9545 |
Ahg924235 | thylakoid lumen 18.3 kDa protein |
| 28.2843 |
Ahg481843 | NAD(P)-binding Rossmann-fold superfamily protein |
| 29.3258 |
Ahg487310 | Protein kinase superfamily protein |
| 39.9875 |
Ahg470335 | protochlorophyllide oxidoreductase C |
| 45 |
Ahg478916 | Uroporphyrinogen decarboxylase |
| 53.4977 |
Ahg939504 | |
| 59.397 |
Ahg930466 | putative type 1 membrane protein |
| 65.2304 |
Ahg470751 | ribosomal protein L4 |
| 65.3452 |
Ahg490167 | photosystem II subunit Q-2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|