Detail


ID : Ahg927264

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927264|scaffold_202825.1
Sequence
ATATTCTGGG TTTTGTGGGA ATGATGACGT CATGTCGGAA TATAGATTTA GGTACGATGA TGATGGCATG TGGTTGCGGC CGTCGTCAAT TTCCTTCCTT AGCAAAGACT GTTGTTTGTA AGTTTGGTAG CAGCAATAGA AGCTATGGCG GTGGGATTCT TTGCAAAGCG GTACCGACGA AATCAAAGGA GATCTCTTTG CTCAATGGTA TTGGTCAAGC TCAAACAGTG ACTTTTGATT TGAGGCATGA GTCTAAACAG CCTATTTCGT TGGTCAATCT GTTTGAGCTA GTAGCTAATG ATCTGCAGAC TTTGAATGAC AATCTTTTAT CGATTGTTGG TGCAGAAAAT CCGGTTCTGA TATCTGCCGC TGAGCAAATT TTCGGAGCTG GTGGTAAAAG AATGAGACCG GGTTTGGTAT TCCTTGTATC ACATGCCACG GCGGAATTAG CAGGCTTAAA GGAACTTACA ACTGAACACC GGCGTTTGGC TGAGATCATC GAGATGATAC ACACTGCAAG CTTGATACAC GACGACGTGT TGGATGAGAG TGATATGCGA AGAGGAAAGG AAACTGTTCA CGAGCTTTTC GGCACAAGAG TAGCAGTGTT AGCTGGAGAT TTCATGTTTG CTCAAGCGTC ATGGTACTTA GCAAATCTCG AGAATCTTCA AGTTATTAAG CTCATCAGTC AGGTGATCAA GGACTTTGCA AGCGGAGAGA TAAAGCAGGC ATCCAGCTTA TTTGACTGCG ACACTAAGCT CGACGACTAC TTACTCAAGA GTTTCTACAA GACAGCCTCT TTAGTGGCTG CAAGCACCAA AGGAGCTGCC ATTTTCAGCA GAGTTGAGAC TGATGTGACA GAGCAAATGT ATGAGTTTGG GAAGAATCTC GGTCTCTCTT TTCAGATAGT CGATGATATT TTGGATTTCA CTCAGTCGAC AGAGCAGCTC GGGAAGCCAG CAGGGAGTGA CTTGGCTAAA GGTAACTTAA CCGCACCCGT GATTTTCGCT CTGGAGAAAG AGGCAAGGCT GAGAGAGATC ATTGAGTCTG AATTTTGTGA GGCGGGTTCT CTGGAAGAAG CAATTGAAAT GGTGAGAGAA GGCGGGGGAA TCAGGAGAGC ACAAGAATTG GCTAGAGAGA AAGCTGATGA CGCGATAAAG AATCTGCAGT GCCTGCCTCG AAGTGCTTTC CGGTCAGCTC TAGAAGAAAT GGTGATGTAT AATCTCGAAA GAATTGATTA GCTTTTCCAA CAGAAGTTAG A
Length1261
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17222214.. 17223971
Download Sequence
A.thaliana
AGI-codeAT1G78510.1
Descriptionsolanesyl diphosphate synthase 1
TAIR curator summaryEncodes a protein with solanesyl diphosphate synthase activity.
Alias[AtSPS1][SPS1][solanesyl diphosphate synthase 1]
Gene coexpression
MR
MR Locus Description
6 Ahg905775 AMP-dependent synthetase and ligase family protein
9.64365 Ahg494803 FtsH extracellular protease family
10.9545 Ahg939527 Aldolase-type TIM barrel family protein
14.4222 Ahg943979 myo-inositol-1-phosphate synthase 1
16.2481 Ahg496704 general control non-repressible 5
18.7083 Ahg474138
20.7364 Ahg910330 FTSH protease 8
22.2935 Ahg479910 Protein kinase superfamily protein
25.4558 Ahg489859 Sucrose-phosphate synthase family protein
27.1293 Ahg478103 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression