| Annotation |
|---|
| Description | jgi|Araly1|928725|scaffold_301182.1 |
| Sequence |
TTGATTCGGA TGAAGGGAAG AGATGGTTAC TGATAGCTAC ATGGATACGA GATCAAATTT GACAAGTGTG AATCGAGGAT CCAATGTGGA TCTCGAGGAT CGATTCCAGA GGGAGCTCGA ATCTTTGCTC CAACAACATC GTAATCGGCA AACATTTGGC CGAGAGAGAG AACGAGACAT TGATGTTCAC AGAAGCGGAA GCGCGCCTCC TACGGTGGAA GGTTTGTTGA GGGCTATGGA TAATCAGTAC TGGAACAATA ATAACTCTGA TCATAGAGAT GTTGGGAATG TTAACAGTTT TAGCACTAGC AATGGCGTTG AGCTTTTGTC TGATGATGAG CTACGTTGGC ACCCTGAGTA TCTCTCTTAT TACTATTCGA ATGAACATTC CAATCCGAGG TTGCCTCCTC CGTTGTTGTC TAGAGAGGAT TGGAGGGTTG CTCAGAGGTT TCACAACAGT GAGTCTGTGT TTGATCCTGT TGGGGAATGG AGGAAGAAAG CGGTTGAAGT CGACAACTCC TCATCGCTCT TCTCGGTTCA GCCAGGGGTT CCAGTTGAGC AGGCAGAGAA TGATTTGATG GAACTGAGGA ATGCTGTAGC TCAGGGCCGC TCTCAGAAGG TGCAGCGGCT AGATCAAGGC AGAGAAGATT TTATTGGATT ATCTGGATAT CCTGGGCTTG GACCGAGAAG GAAGAGTTTC GCCGATATAC TTCAGGAAGG ACTTGAACGG GATGCAACCT TAGGCAGCCA ACTCTCTCGG CCTGCAAGCT GCAACACTTT TCGGGACATG AAAGATTCTG CTGTTTTATC GAATTTCAGT GCTGGTGGAT TCGACAGCCC ATTAGCATTC CATGAATCAT TACATGCTAC TGCCAAAAAC AGTCCAAATA CTATGCTTGG CTCCACCACG AGTTCCCCAG TGCCAAGAAA TAGAACTCCT GACTCACATC TAGTAGGGCG ATCTCCGGCC TCTGGCCTTC CCCCTATTGG TACCAGGGTC GGTCCTGTCG AGAAAAAGAA TACTTTTGGC ACAGCCATCC AAAACTCTGA ATCTTACACT GCTGCCGATG TTGCCGACAC ATTGTCGAGG TTGAACATGT CAGAGATGAG TCAAGTAAAA GAAAACCATA TGCAGTCACA GCTTCAAGTG GAATTGGAGA ATCAATCTGA TGTCATGCGT TACATACCCA ATGGTCATAA GAAGGCTTTG CGGCAACAAG ATATTGCTAT GGCAGAATCA AAAGATCACT TGTTTTCTGC AAATTATGGT GGAATGAGTG GGTATGGAAC AAGTCTTGGA GCTTCTACAG TGGGTTCCCA TGGACAGGTC AACATCCCTA AACGAACCTC CTCTTCAGCG AGTCTTTACT CAACTTCAGA ACATTCTAGA TTAGGAAGCC TGGGCTTATC TGATGTCAAT ATTCGGAATG CAAATATTAA TGGAACAGAC TTCTCCACAG CTGGTGGTTA TTTGGCAAAG AACAAGTTGA ATTCATTAGC TGAGCACTAT TCCGCTGAAG GCTCACATTT GTCTGGGGAA GGGGATAGAC AAAGCTTGAA CAGATTGATA AATCAAGTTG CTTCTGAGCT TCACTCTCCA GTTATGGACC CACATTACAG CCAGTATCTG CATACGGCAT CTTCTACTGC TGCACCAACC GATCATTCTC TTATGAGAAA CAATTTTGGG ACTTCAAACG GAGATACGGC TAATGAATAC CTTGCGATGT TACTTGCTCA AAACAGGCAA CAGCTGGGTA ACCTCAGTGC TGCAAATTCT AGATTTTTTG AGAGTCCTTC ATATGATCTT GGCAACATTT ATCTAGGAAA CCATTTGCCT TCTCCTTCCA AGAATGCAAG AAATTTCCAG AACATGCGTA TGTCACAATC TGCCTCAATG ATGAAAGTTC CATTCGGAGG CTTACAGGGA TCATCCCATG TAGATATTGG CAGCACGGCA GACGCATCCT TACTAGAGGG GTTTAAGAAC AACAAGACAA GGTCTTTGGA GCTTTCAGAA ATAGTTGGTC ATGTGATTGA GTTCAGCATG GATCAGTACG GAAGTCGTTT CATTCAGCAG AAACTTGAGA CTGCAACGGA TGAGGAAAAG AATGCTATAT TCCCTGAGAT ACTTCCTTAC GGCCGCACTT TAATGACAGA TGTCTTTGGA AATTATGTTA TTCAAAAGTT TTTTGAGCAT GGTACAAACA AGCAGAGAAA AGAACTCGCT GAACAAGTAA CAGGCCATGT TTTGGCTCTT TCTCTACAAA TGTATGGCTG CAGGGTTATC CAAAAGGCGT TAGAGGTGGT TGAATTGGAG CAGCAAGCTC GAATGGTGCA AGAGCTTGAT GGGTCTGTCA TGAAATGCGT TCATGACCAG AACGGTAATC ATGTGATCCA GAAGTGTATA GAGCGTCTTC CTCAGGATTG GATACAGTTC ATCATTTCTT CATTCTACGG AAAAGTTTTA GCTCTTTCAA CACACCCTTA TGGATGCCGT GTAATCCAGA GGGTACTGGA GCATATTGAT GACATAGAAA CCCAACGGAT CATTATGGAG GAAATCATGG ATTCAGTCTG TACTCTAGCA CAAGATCAGT ACGGTAATTA TGTTATTCAG CATATCATAC AACACGGTAA ACCTCATGAA CGGTCAGAAA TTATCAATAA GCTTGCTGGA CAGATTGTGA AGATGAGTCA GCAAAAGTTT GCTTCTAATG TTGTTGAAAA GTGCTTAACA TTTGGCGGTC CAGAGGAACG CCAGGTACTA GTGAATGAGA TGCTTGGTTA TACTGATGAG AACGAGCCTC TTCAGGCGAT GATGAAGGAC CCATTTGGGA ACTACGTAGT GCAGAAGGTT CTTGAAACAT GCGATGATCA AAGTCTTGCA CTCATTCTTT CTCGCATCAA AGTACATTTG AATGCCTTGA AGAGATACAC ATATGGGAAA CATATCGTTG CCCGGGTTGA GAAACTTATC ACTACCGGAG AGAGAAGAAT CGGGCTCTCG TCATCTCTTG CCGCAAACGC TACTCCTTAA CCATCTCTGA GTAAGTAAAA CCT |
| Length | 3063 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3879260.. 3883162 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G10360.1 |
| Description | pumilio 4 |
| TAIR curator summary | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. |
| Alias | [APUM4][PUM4][pumilio 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg478846 | 20S proteasome alpha subunit E2 |
| 6.9282 |
Ahg318610 | CCAAT-displacement protein alternatively spliced product |
| 7 |
Ahg489749 | stromal ascorbate peroxidase |
| 7.14143 |
Ahg472939 | squamosa promoter binding protein-like 10 |
| 8.66025 |
Ahg940460 | |
| 9 |
Ahg922878 | SEUSS transcriptional co-regulator |
| 9.16515 |
Ahg919131 | MOS4-associated complex 3A |
| 9.8995 |
Ahg470311 | Small nuclear ribonucleoprotein family protein |
| 10.0995 |
Ahg913547 | polypyrimidine tract-binding protein 3 |
| 10.9545 |
Ahg311357 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|