Detail



ID : Ahg933558

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933558|scaffold_401546.1
Sequence
CAAATCAATT GAAGAGTCTC TCAGTCGTTA GGGGAAGCAA ATAGAGAAAT GGCTAGCTTT ACTGCCTCCG CTTCCACCGT CTCCGCCGCT CGTCCGGCTC TCCTTCTCAA GCCTACCGTC GCCGTCTCCG CTCCTGTTCT TGGTTTGCCT CCAATGGGTA AGAAGAAGGG AGGAGTGAGA TGCTCAATGG AGACAAAGCA AGGAAACGTC TCAGTCATGG GGGCTGGAGT TTCAGCGGCT GCAACAGCTG CTTTGACAGC GGTGATGAGC AATCCCGCGA TGGCTTTGGT TGATGAGAGG ATGTCGACAG AAGGAACAGG ATTACCTTTT GGCCTAAGCA ACAACCTCTT GGGTTGGATT CTGTTTGGAG TCTTCGGTTT GATCTGGACT TTCTTCTTCG TCTACACTTC ATCTCTCGAG GAGGATGAAG AATCTGGTCT TTCACTCTGA AGAATCAAAT CTTCTTCTTC 
Length470
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13557348.. 13558154
Download Sequence
A.thaliana
AGI-codeAT2G30570.1
Descriptionphotosystem II reaction center W
TAIR curator summaryEncodes a protein similar to photosystem II reaction center subunit W.
Alias[PSBW][photosystem II reaction center W]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg472262 Cupredoxin superfamily protein
6.245 Ahg477073 photosystem II subunit R
6.9282 Ahg470899 photosystem I subunit O
13.6015 Ahg945720
13.7113 Ahg486922 light harvesting complex photosystem II
13.7477 Ahg922093 photosystem I subunit K
14.4914 Ahg924950 2Fe-2S ferredoxin-like superfamily protein
15.4919 Ahg480223 photosystem II subunit X
16.9706 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
19.6214 Ahg496993 ferredoxin-NADP(+)-oxidoreductase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression