Detail



ID : Ahg924950

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924950|scaffold_200511.1
Sequence
CTCAAAAATC TCAACTTTAT CTCCCAAAAC ACAAAACCAA AAAAATGGCT TCCACTGCTC TCTCAAGCGC CATCGTCGGA ACTTCATTCA TCCGTCGTTC CCCAGCTCCC ATCAGTCTCC GTTCCCTTCC ATCAGCCAAC ACACAATCCC TATTCGGTCT CAAATCAGGC ACCGCTCGTG GTGGACGTGT CACAGCCATG GCTACATACA AGGTCAAGTT CATCACACCA GAAGGTGAGC AAGAGATTGA GTGTGAAGAC GACGTTTACG TTCTTGACGC GGCCGAGGAA GCTGGAATCG ATTTGCCATA CTCTTGTCGT GCTGGTTCTT GTTCAAGCTG TGCTGGTAAA GTTGTGTCTG GATCTGTTGA TCAGTCTGAC CAAAGTTTCC TTGATGATGA ACAGATTGGT GAAGGGTTTG TTCTCACTTG TGCTGCTTAT CCTACTTCTG ATGTTACCAT TGAAACTCAC AAAGAAGAAG ACATTGTTTA AGCTTCACCT ACCAGCTTTT G 
Length511
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2631974.. 2632484
Download Sequence
A.thaliana
AGI-codeAT1G60950.1
Description2Fe-2S ferredoxin-like superfamily protein
TAIR curator summaryencodes a major leaf ferredoxin
Alias[ATFD2][FD2][FED A][FERREDOXIN 2]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg485801 high cyclic electron flow 1
5.47723 Ahg938526 sedoheptulose-bisphosphatase
12 Ahg472262 Cupredoxin superfamily protein
12.4499 Ahg476582 Pyridine nucleotide-disulphide oxidoreductase family protein
12.8062 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
14.1774 Ahg481233 other RNA
14.4914 Ahg933558 photosystem II reaction center W
16.5227 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
16.7929 Ahg492755 photosystem II subunit QA
17.3205 Ahg940828 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression