Detail



ID : Ahg933714

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933714|scaffold_401702.1
Sequence
TCTCTCTAGA AATCAGAAAA AAACGATGTC GTCCGATGAC GAAGGAGGAG AGGAGTATCT CTTCAAGATA GTGATCATCG GCGACTCTGC CGTCGGGAAA TCGAACCTTC TCTCTCGCTA CGCTCGTAAC GAGTTCAACG CTCATTCCAA AGCCACGATC GGCGTCGAGT TCCAAACGCA AAACATGGAG ATCGAAGGAA AAGAGGTTAA AGCTCAGATT TGGGATACTG CTGGTCAGGA ACGGTTCCGT GCCGTCACTT CCGCTTATTA TCGCGGCGCC GTCGGAGCTC TCGTCGTTTA CGATATTAGC CGTCGATCCA CGTTTGAGAG CGTTGGTCGT TGGCTTGATG AGCTTAAGAC ACATTCGGAT ACAACAGTTG CGAGGATGCT GGTGGGAAAC AAATGCGATC TAGAAAGCAT AAGAGCGGTG AGCGTGGAGG AAGGCAAAGC ACTAGCGGAA ACCGAAGGAC TATTCTTCAT GGAAACATCA GCTCTCGATT CAACAAATGT TAAAACAGCT TTTGAAATGG TAATCCGTGA CATCTACACC AATGTTAGCC GGAAACAACT CAATTCCGAC ACTTATAAAA CCGAACTAAG CATGAAGAAC CGAGTAAGTC TCGTTAAGGA CGATAACAAA GGGTCCACAC AAGGCTTTGG TTTCTCTTGC TGTTCTTCCT CGTGACCAAA TTATTTTTCT TTTGC 
Length705
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14210109.. 14211423
Download Sequence
A.thaliana
AGI-codeAT2G31680.1
DescriptionRAB GTPase homolog A5D
TAIR curator summary
Alias[AtRABA5d][RABA5d][RAB GTPase homolog A5D]
Gene coexpression
MR
MR Locus Description
32.0312 Ahg485401 CDPK-related kinase
34.8712 Ahg490575 Mitochondrial transcription termination factor family protein
44.7661 Ahg493585 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
46.2169 Ahg480347 TRICHOME BIREFRINGENCE-LIKE 13
54.037 Ahg319762 Translation elongation factor EF1B/ribosomal protein S6 family protein
54.7723 Ahg482168 glutamate receptor 5
56.4978 Ahg495287 Sugar isomerase (SIS) family protein
60.2246 Ahg944585 histone deacetylase 14
60.8933 Ahg482933 pseudouridine synthase family protein
63.3404 Ahg477315 NAD(P)-binding Rossmann-fold superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression