Detail



ID : Ahg934736

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934736|scaffold_402724.1
Sequence
TCTTTCAGAT CCCTATTCCC ATGGCTTCTG GATCTTACTG GTGTTATAGT TGTAGCCGAT TCGTTTGGGT TTCCGATTCT CTCTCTTGCC CTGATTGCGA CGGTGGTTTC CTCGAACACA TCCAAGAAAC TCTCGATTTC ACACCTTCCG ATTCCTTCCA CCGTCTCACC ACCACCACTC AACATCGCAG CCCCACTCGC TTCCCTCCTT CCTCCTCTTC TTCTTCGACC CCCTCCGCTT CCATGCACGC TTCCACCGCC GAGAACAGTC CCACTCCTAC CACCGTTACT CGTACCCGAA GCAATCGATC TCCTAATCCG GTTATTGTTC TCCGTGGATC TGGTGCTCCT TCTGATGTTT CCGAAGGTTT AGATCGATCT GCTTTTCAGA TGTATTACGA TGATGGTACT GATTCTGGTC TTAGACCTTT ACCACCGAGT ATGACTGAGT TTTTGTTAGG TTCTGGATTT GATCGCTTGT TAGATCAGAT CTCTCAGATC GAGCTTAACA CCAATCGGAT TCATCGTTCT TGTGAACATC CTCCGGCTTC TAAATCGGCC ATTGAAGCTT TACCTCTGAT TGAAATCGAT CCGACTCATC TCGAATCGGA TTCTCAATCT CATTGCGCTG TTTGCAAAGA GAATTTCGTT TTGAAATCAT CTGCTCGTGA GATGCCGTGT AATCACATCT ATCATCCTGA TTGTATCCTT CCTTGGCTTG CGATTCGAAA CTCTTGTCCG GTTTGCCGTC ATGAGCTACC GACGGAGGAT CTCACCGACG GAAGCGGTGG CGCTTTGACT GTTACCGCTA CTGCAGAGGA AGAGGAAGAC TCCGCGGCAG GGTTGACGAT TTGGAGGTTA CCAGGTGGAG GATTCGCTGT TGGGAGAATC CCTGGTGGTT GGAGAGGAGG AGATAGAATG ATGCCGGTGG TTTACACGGA GGTTGACGGT GGTAGACTCG GTGATGAGAG ACTTCCGAGG AGAGTAGCTT GGGGTTCGAG AAGAGGAGGA AGAGATGGAG GTAGTAGAGA GAGAGGTGGC GGGTTTGCGG GTCGGATCAT GAGGCTTTTT GGATGTTTTA GTGGGTCATC TGGATCCATA GCTGCTGCTG CTGCATCGTC TGGATCCGGG TCGAGAATTC GGGTTACCCG TAGAACCAGG TCGTTCTCTA TGTTTAGTAC GGCTTCGTCT TCGTCAAGGA GACGAAATTG GCTAGCGTGA TTACTAGAAT TATCGTCCCC TCT 
Length1243
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18295906.. 18297138
Download Sequence
A.thaliana
AGI-codeAT2G39720.1
DescriptionRING-H2 finger C2A
TAIR curator summaryEncodes a putative RING-H2 finger protein RHC2a.
Alias[RHC2A][RING-H2 finger C2A]
Gene coexpression
MR
MR Locus Description
7.28011 Ahg471773 Transducin family protein / WD-40 repeat family protein
10.583 Ahg483148 protein kinase family protein / protein phosphatase 2C ( PP2C) family protein
21.4243 Ahg929969 calmodulin-domain protein kinase 9
22.891 Ahg890655 TOPLESS-related 2
27.1109 Ahg477791 Transducin/WD40 repeat-like superfamily protein
31.241 Ahg476847 tubby like protein 1
31.3688 Ahg491768 autoinhibited Ca(2+)-ATPase 10
34.7994 Ahg488432 CONSTANS-like 1
35.4965 Ahg897324 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
36.1248 Ahg481753 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression