Detail


ID : Ahg947925

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947925|scaffold_704154.1
Sequence
ATCAATATTA CCAAAAAGAA ATGGTTTCAT CACTTAACAT CATCGACGTT GCACGAGTCA CCCCTTCAAA CTCTGAATCG ACCGACTCAC TCACTCTCCC ACTAACCTTC TTCGACCTCC TCTGGTTCAA GATTCACGCC GTGGAACGAG TCATCTTCTA CAGACTCAAC GACGCAACTT GCTCTTTCTT TGACTCAGTC ATCGTCCCCA ATCTCAAAAC CTCTCTCTCC TTATCCCTCT CTCACTATCT CCCACTCGCC GGAAAACTCG TCTGGAAACC ATTTGAACCC AAACCAAGCA TTGTATACAC CCCAAACGAC GCCGTTTCAT TCACCGTCGC CGAGTCAAAC GCCGATTTCT CCCGCTTAAC CGGAATAGAA CCATTCTCCT CCAACGAGTT GCACCCATTA GTCCCCGAGT TACAAAACTC CGACGACTCG GCTTCCGTCA TGTCATTTCA AGTCACGTTA TTTCCAAACC AAGGGTTTTG CATCGGCGTA ACCGCACACC ATGCCGTTTC TGATGGGAAA ACGACAACCA CTTTTCTCAA ATCTTGGGCT CACTTCTGTA AACACCAAGA TTCTTCTCTA CCGGAGGATC TGATTCCGTT TTACGATCGT ACGGTCATAA AAAATCCACC GAATAGTGAT ATAAAACTTT TGAACTCATG GCACTCTTTA GCCAAAATGT TCTCCGGCGG TAAAGAACCA CAAAACCCCA AGAGTTTGAA GCTTCCTCCA TCGCCGGTGA TTGATCCTGA CGTCTTACGA TACACTCTTG AGCTAACTCG CGAAGATATC CAAATGCTTC GAGAGAGACT CAAGAGAGAC TCACCAAAGG AACTTCGTTT GTCAACGTTT GTGGTAACAT ATTCATATGC TTTAACGTGC TTAATCAGAG CTCGAGGCGG AGATCCGAAT AGACTTACCG GGTTTGGTTT TGTTGCGGAT AGTCGAAAAC TAGTCAATCC GCCAATCCCG TTGAGTTATT TCGGCAATTG CGCCACCGGT ACTTTTAAAG TGCCATTACG AGCAGAAACG TTTATGGCTA AAGAAGGGTT TTTGGCTTCT ACGAGATTGG TGAGCGATTC GGTTGAGGAA CTGAACGAGA GTGTGGTGTG GAAGATCCCA GATTTTGTAG CATTTTGGAC ACAACTTCCA CTAGGTACAC AGATTGTTTC TGTTGCCGGG TCGACCAAGT TTGGAGTATA CGGGTTGGAT TTCGAGTGGG GCAGACCGGA GAAAGTGGTG ATTGTGTCAA TTGATCAAGG TGAAGCGATT TCCTTGGTGG AGAGTAGATT TGGGAATGGT GGTGTGGAGA TTGGCTTCTC GCTCAAGAAA CATGAAATGG ATGTTCTCAT TGATTTGCTC CATAACGGAC TAAAAATGTA ACTACTTTTC CTTCAAATAA A
Length1411
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22015701.. 22017111
Download Sequence
A.thaliana
AGI-codeAT5G39050.1
DescriptionHXXXD-type acyl-transferase family protein
TAIR curator summary
Alias[PMAT1][phenolic glucoside malonyltransferase 1]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg350602 high affinity nitrate transporter 2.7
10.9087 Ahg477874 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
16.7929 Ahg470720
19.2873 Ahg483346 cold regulated 15b
20.1494 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
20.4939 Ahg486251 plastoglobulin 34kD
22.0907 Ahg490053 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
29.6648 Ahg920960 Pathogenesis-related thaumatin superfamily protein
31 Ahg902559 glycoprotease 1
32.8634 Ahg939212 Fatty acid/sphingolipid desaturase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression