Detail



ID : Ahg920960

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920960|scaffold_102241.1
Sequence
TTTCTTCAAT CTCAGGAGTT ATGTCAAGGA GCTTCACATT TTCGAACAAA TGCGAATACA CAGTGTGGCC GGGAATTCTA TCTAACGCCG GAGTTCCTCC ATTATCAACT ACAGGCTTCG TCCTTCAGAA AGGCGAGACG CGTACAATCG ACGCGCCGTC TTCATGGGGT GGTCGTTTCT GGGGAAGGAC ACTCTGCTCT ACCAATTCCG ATGGAAAATT CTCCTGCGCA ACTGGAGATT GCGGTTCCGG AAAACTTGAA TGCTCCGGCG CTGGAGCTGC CCCTCCTGCG ACTCTAGCTG AATTTACCCT CGATGGCTCC GGAGGACTCG ATTTCTACGA TGTCAGCCTC GTCGACGGCT ACAATGTTCA GATGCTGGTG GTTCCTCAAG GTGGCTCCGG TCAGAATTGT AGCAGCACCG GCTGCGTCGT CGATTTAAAC GGCTCATGTC CGTCCGAGCT AAGGGTAAAT AGCGTCGGAG GTGACGGCGG CGGTGGGAAA GGGGCGGTGG CGATGGCGTG TAAAAGCGCG TGCGAAGCAT TTCGGCAGCC GGAGTATTGC TGCAGCGGGG CGTTTGGGTC GCCTGACACG TGTAAGCCGT CTTCGTACTC GAGGATCTTC AAGAGCGCGT GTCCACGCGC CTATAGCTAC GCGTATGACG ATAAGTCTAG TACATTTACG TGCGCGAAAT CTCCCAACTA CGTTATCACT TTCTGTCCTT CTCCCAACAC CAGCCTAAAA TCAGCCGAGG AACAGAGCAC AGAGACAATG ACGACGACAA GTCCAAGCTC CGGCAGTACG ACGTCGTCGC AGATGGTCTA CGAAGGTGCT CTAGACGAAA GGAGTGGTTC ACCATCTACA TGTCACGGCG TATCACGAGC AATCACTGTC GTTCTCTCGC TTGCTTTTTG TCGTATGTGG TGGTTCTTTT GACCAGATTA TATGTCTTAG AA 
Length952
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8154219.. 8155763
Download Sequence
A.thaliana
AGI-codeAT1G20030.2
DescriptionPathogenesis-related thaumatin superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.94987 Ahg942000 pseudo-response regulator 5
12.9615 Ahg477874 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
14.1421 Ahg483346 cold regulated 15b
15.9687 Ahg921302 gigantea protein (GI)
24.8193 Ahg939212 Fatty acid/sphingolipid desaturase
29.1548 Ahg488447 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
29.1719 Ahg492760
29.6648 Ahg947925 HXXXD-type acyl-transferase family protein
31.289 Ahg496615 dentin sialophosphoprotein-related
33.9411 Ahg482064 16:0delta9 desaturase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression