| Annotation |
|---|
| Description | jgi|Araly1|948472|scaffold_800359.1 |
| Sequence |
CACCGGAAAA AGCTTATCGC CATGGAGACA TCATCAATTT CCACGGTCGA CGACCAGCCA CCGCAGCATC AGGTGTTCAT CAATTTCCGT GGGGCGGATT TGCGCCTGAG ATTCGTCAGC CATCTCGTCA AGGACTTGAA ATTGAACAAC ATTAACGTCT TTATCGACGA CTATGAAGAC AGAGGTCAAC CTCTAGATGT ACTGCTGAAG AGGATAGAGG AGTCCAAAAT CGTTTTGGCT ATCTTCTCCG GCAACTACAC CGAGTCAATC TGGTGCGTGA GAGAGCTGGA GAAGATCAAG GATTGTACGG ATGAAGGAAC ACTTGTTGCG ATTCCAATCT TCTACAAGCT CGAGCCATCC ACCGTTAGAG ATTTGAAAGG AAAGTTCGGT GATAGATTTA GAAGTATGGC TAAGGGTGAT GAGAGGAAGA AGAAGTGGAA AGAAGCTTTT AACTTGATTC CTAACATTAT GGGCATCACC ATTGACAAGA AAAGTGTCGA GAGTGAGAAA GTCAATGAAA TTGTGAAGGC GGTGAAGACA GCGCTGACCG GGATTCCTTC GGAGGGAAGC CAAAATGCCG TCGTGGAGGC TTTAGGAAGT GGCAACGCTG GAACTTCCTC AAGAAGTTGG ACCTTCATAA ATACAAGGGA CTCGTTTCAT TGGACTTTTG GGATGCCCGG AATTGGTAAA ACCACACTGC TGAAACAGCT ATATAAGACG TGGCAGGGCA AGTTTTCGAG GCATGCGCTA ATCGATCAAA TCCGTGTAAA GTCCAAGCAC TTGGAGTTGG ATCGCTTGCC TCAAATGCTC TTAGATCCAT ACAGTCAACT GCATGAACGC AAAGTTCTTG TTGTACTTGA TGATGTTAGT AAAAGGGAAC AAATAGATGC TCTTCGTGAG ATACTAGACT GGATTAAGGA GGGTAAGGAG GGAAGCAGGG TTGTCATTGC AACAAGCGAC ATGTCTTTAA CAAATGGTTT GGTTGATGAT ACTTACATGG TTCAAAATTT GAACCACAGA GATAGCTTAC AACTATTTCA CTATCATGCA TTCATTGATG ATCAAGCCAA TCCTCAAAAG AAAGATTTCA TGAAGCTGTC AGAAGGGTTT GTACATTACG CCAGAGGCCA TCCACTAGCC CTGAAAATAC TGGGTGGAGA GCTTAATAAG AAAAGTATGG ATCATTGGAA TTCAAAAATG AAGAAACTTG CACAGAGTCC CAGCCCTAAT ATTGTAAGTG TCTTCCAAGT GAGTTATGAT GAATTGACTT CAGCGCAGAA AGACGCATTT CTCGACATAG CCTGTTTTAG ATCACAGGAC AAGAATTATG TAGAAAGTTT ACTGGCTTCA TCTGATCTTG GATCTGCTGA AGCAATGAGT GCAGTAAAAA GTCTCACGGA TCAGTTCCTG ATTAATACTT GTGATGGGCG GGTGGAGATG CATGATCTAT TGTATAAATT TTCAAGGGAA CTTGATCTTA AGGCATCTAA TCAGAATGGT AGCAGACAAC GGAGGCTGTG GCTCCATCAA GACATAATCA AGGGAGGCAT AATTAATGTA CTGCAAAATA AAATGAAAGC TGCCAATGTT AGAGGTATTT TCCTAGACTT GTCTGAAGTG AAAGACGAAA CGAGCTTAGA CCAGGTTCGA TGCCTCCACT GGCTGAAATT CCCATTGGAG ACACTTCCAA ACGATTTTAA CCCGATTAAT CTTGTCGACC TTAAGCTGCC CTACAGTGAG ATTGAACAAC TTTGGGATGG TGACAAGGAT ACACCATGCT TAAGGTGGGT CGATCTCAAT CACTCAAGTA AGTTGTGCAG CTTGTCAGGG TTATCAAAAG CTGAAAAGCT TGAAAGGTTG AACCTTGAAG GTTGCACAAC ACTGAAAGCG TTGCCACACG ATATGAAAAA AATGAAAATG CTTGCTTTCC TGAATCTCAA GAGGTGCACA AGTCTCGAAT CTCTTCCAGA GATGAATTTG ATTTCTCTGA AAACACTTAC TCTCAGCAGC TGCTCAACTT TTAAGGAATT TCCGTTGATT TCAGATAATA TAGAAACTCT ATACTTAGAT GGCACAGCAA TAAGTCAGCT TCCTACGAAC ATGGAGAAGC TCCAGAGACT TGTTGTACTG AATATGAAAG ACTGCAAAAT GCTGGAGGAA ATCCCAGGCC GTGTTGGTGA GCTGAAAGCT CTTCAAGAAC TGATACTCTC TGATTGTTTA AATCTCAAGA TTTTCCCAGA AATCAACATG AGCTCTTTAA ACATTTTACT TTTGGATGGG ACAGCCATTG AAGTGATGCC ACAATTACCC TCACTGCAGT ATTTGTGCTT AAGCAGGAAT GCTAAGATCA GCTACCTTCC TGATGGAATC AGTCGGCTTT CTCAACTTAA ATGGCTGGAC CTGAAGTATT GTACGAGTCT CACATCAGTG CCAGAGTTTC CACCAAATCT TCAGTGCTTA GATGCACACG GCTGTAGTTC GCTGAAGACA GTTTCAAAGC CTCCTGGCCC GTATCATGCC AACCGTACAG AATCATTCCA CATTCATTTT CACCAACTGT GAGAACCTGC AACAAGCTGC AA |
| Length | 2582 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2013107.. 2016237 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45250.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) family |
| TAIR curator summary | RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames. |
| Alias | [RPS4][RESISTANT TO P. SYRINGAE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.74597 |
Ahg473691 | |
| 10.583 |
Ahg321495 | copper ion transmembrane transporters |
| 22.6936 |
Ahg893775 | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases |
| 24.8193 |
Ahg478089 | Transcription factor jumonji (jmjC) domain-containing protein |
| 25.0998 |
Ahg495713 | |
| 27.6043 |
Ahg478682 | multidrug resistance-associated protein 3 |
| 28.4605 |
Ahg471472 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 28.6356 |
Ahg352131 | ubiquitin-specific protease 10 |
| 29.0172 |
Ahg491819 | protein kinase family protein / WD-40 repeat family protein |
| 35.2136 |
Ahg483731 | U-box domain-containing protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|