Detail



ID : Ahg951288

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951288|scaffold_803175.1
Sequence
GTTTCACTTT TACCTAAGGC TACAATGTTG CCACCATTAG TCATTTTGGT TGGTACTTGG TCCTTTTCAA AAACAGTTGC AGCCAATTAT TGGTCTCTGT ACTTTGAATC TCTTAACATT GTCACAAGCC GCAACTTGTA TTACACTATT GACTCAAATG CTTTTGTGAT TATTAGTCTC AAAAAGTTTC TCTTGAAGAT GGACAGGGCA GATACATGGG GATTTGTCAG TGGTGGGAGA TGTTTATATC TCAAGTTGCT TTTATGTTTA TAGCTCTACA AGGTGTTCTA AGT 
Length293
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20218988.. 20219370
Download Sequence
A.thaliana
AGI-codeAT5G64552.1
Descriptionconserved peptide upstream open reading frame 22
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF22 represents a conserved upstream opening reading frame relative to major ORF AT5G64550.1
Alias[CPuORF22][conserved peptide upstream open reading frame 22]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg944194 RUB1 conjugating enzyme 1
12.0416 Ahg932011
17.9444 Ahg320761 ZIP metal ion transporter family
35.4965 Ahg894629 Drought-responsive family protein
36.8782 Ahg925953 photosystem II reaction center protein C
40.9145 Ahg489488
44.8888 Ahg915734 Ubiquinol-cytochrome C reductase hinge protein
53.5164 Ahg476870 K-box region and MADS-box transcription factor family protein
63.1664 Ahg358659 conserved peptide upstream open reading frame 22
66.1816 Ahg938658 A20/AN1-like zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression