Detail



ID : Ahg951589

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951589|scaffold_803476.1
Sequence
GATCGATTTA CGTTTTGTCA ATGAAATCGA AAAGGGGTTT TTCGCCGGAG CCAGAGGAAG AGGAGAGAGT GCAGTCTTTG ACGACTCTCC CCCATCGTTG GTTTTGTGCT CAAATTTCGG TCGGACCGTT ATTATCCGGT TCATGTTATT GCATGATGCC TAATACCGAG ACTAGATGCT CAAAACAAGA AGAACTGAAG CAAATCCACG CTCGCATGCT GAAAACTGGC TTGATTCAGG ATTCTTATGC AATCACAAAG TTTCTTTCTT GCTGCATTTC TTCGACTTCT TCCGACTTTT TGCCTTATGC CCAGATTGTG TTTGACGGGT TTGATCGACC AGGTACTTTC TTGTGGAACC TAATGATCAG AGGGTTCTCG TGCTCAGACG AACCTGAGAG GTCTCTTCTT CTGTATCAAC GTATGCTCTG TTGTTCAGCT CCTCATAACG CATATACTTT TCCGTCTCTT CTCAAAGCTT GTTCGAACCT ATCTGCATTT GAAGAAACAA CGCAAATTCA CGCACAGATC ACGAAACTTG GATATGAAAA TAATGTATAC GCAGTGAATT CGCTGATTAA TTCATATGCT GCGACCGGGA ACTTCGAGCT AGCTCACCTT CTCTTTGACA GAATGTCCAA ACCCGATGCT GTCTCATGGA ACTCTGTGAT TAAAGGGTAC GCAAAAGCTG GAAAAATGGA TATTGCGTTA ACGTTATTCA GGAAAATGGC AGAAAAGAAT GCTATATCAT GGACTACGAT GATCTCTGGG TATGTTCAAG CAGGCATGAA CAAGGAAGCT CTGCAATTAT TTCATGAAAT GCAGAATTCA GATGTTGAGC CTGATAATGT TTCCCTAGCT AATGCTCTCT CAGCTTGCGC TCAGCTCGGA GCACTCGAGC AAGGGAAATG GATTCATTCC TATCTTAATA AAACAAGAAT CAGAATGGAC TCTGTTTTGG GTTGTGTTCT TATAGATATG TATGCAAAGT GCGGTGACAT GGAAGAAGCT TTGGAAGTTT TCAAGAATAT TAAGAAAAAA TCAGTGCAAG CATGGACAGC TTTGATTTCC GGATATGCAT ACCATGGCCA TGGAAGAGAA GCAATTAGCA AATTCATGGA GATGCAAAAG ATGGGAATAA AGCCAAATGT CATAACTTTC ACTGCGGTTC TCACGGCTTG CAGCTACACT GGACTAGTTG AAGAAGGAAA GTTGATATTC TACAGTATGG AGAGAGATTA CAACCTGAAA CCGACCATCG AGCATTATGG CTGTGTTGTT GATTTACTCG GTCGAGCTGG ATTGCTAGAT GAAGCAAAAC GTTTCATTCA GGAGATGCCA TTGAAGCCAA ATGCTGTGAT ATGGGGTGCG TTGCTCAAAG CCTGTCGGAT TCACAAAAAC ATCGAATTGG GAGAGGAAAT TGGAGAAATC TTAATTGCAA TAGATCCATA TCATGGTGGG AGATATGTTC ATAAGGCAAA TATTCATGCT ATGGGCAAGA AGTGGGACAA AGCAGCTGAA ACAAGAAGAT TGATGAAAGA ACAAGGAGTA GCAAAAGTTC CAGGATGTAG TACAATTAGC TTGGACGGGA CCACACACGA GTTTTTAGCG GGAGACCGAT CACATCCAGA GATAGAGAAA ATTCAATCTA AATGGAGAAT CATGAGAAGG AAACTTGAGG AAAACGGGTA CGTACCAGAG TTAGAGGATA TGCTGCTTGA TCTAGTTGAT GATGATGAAA GAGAGGCTAT TGTGCATCAG CACAGCGAGA AATTGGCTAT TACATACGGG TTAATCAAGA CTAAACCAGG AACCACTATA CGTATAATGA AGAATCTCCG AGTATGCAAA GACTGTCACA AAGTAACGAA ACTCATCTCT AAGATATACA AGAGAGATAT CGTAATGAGG GATAGGACAA GGTTCCATCA TTTCAGAGAT GGGAAATGCA GTTGTGGGGA CTACTGGTAA AATTTGGAGA GGAAATAAGA CT 
Length1992
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21366929.. 21369200
Download Sequence
A.thaliana
AGI-codeAT5G66520.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.53939 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
14.4914 Ahg347878
18.1659 Ahg484365 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
20.4939 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
24.3311 Ahg479525 ubiquitin-conjugating enzyme19
26.7208 Ahg318925 cyclin p2;1
33.2866 Ahg496250 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
33.4963 Ahg486055 Protein of unknown function (DUF399 and DUF3411)
38.6135 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
41.7732 Ahg929130 beta galactosidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression