Detail



ID : Ahg496250

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496250|fgenesh2_kg.8__2066__AT5G60970.1
Sequence
CATTCCTCTG CCTCCTTATC TCTTCCTTAC TCTTCCTCTT GTTCCTTCTT CTACTTCTCT ATCAAGCTAG ATCTTGAACT AGGACTCAAG CTTACCAGTC TTCAATCGAC ATGTTGCAAC AGCAACGACC GAGTTCGGTA TCATCATCTT CAAGGCAATG GACTTCAGCT TTTAGGAATC CAAGAATCGT TCGAGTCTCA AGAACATTCG GTGGCAAAGA CAGACATAGC AAAGTCTGTA CGGTCCGTGG TCTTCGAGAC CGGAGGATAA GGTTGTCCGT ACCTACAGCT ATTCAACTCT ACGACCTTCA AGATCGATTA GGGCTGAGTC AGCCAAGCAA AGTCATCGAT TGGTTACTCG AAGCAGCAAA AGATGACGTC GACAAGCTAC CTCCTCTACA ATTCCCACAT GGGTTTAACC AAATGTATCC AAATCTCATC TTTGGAAACT CCGGGTTTGG AGAATCGCCA TCTTCAACTT CATCAACAGC GTTTCCAGGA ACCAATCTCG GGTTCTTGGA AAATTGGGAT CTTGGTGGTT CTTCCAGAAC AAGATCAAGA TTAACCGATA CTACTACGAC CCAGAGAGAA AGTTTTGATC TTGATAAAGG AAAATGGATC AAACACGACG AGAATAGTAA TCACGATCAT CAAGGGTTCG ACACCAATCA TCAACATTTT CCACTGACCA ATCCTTACAA CAACACTTCA TCTTATTACA ACCTCGGACA TCTTCAACAA TCGTTAGACC AATCCGGTAA TAACGTTACT GTCGCAATAT CTAATGTTGC TGCTAATAAC AACAATAATC TCAATTTGCC TCCTCCTTCC TCGTCTGCTG GAGATGGATC TCAGCTTTTT TTTGGTCCTT CTCCTCCAGC AATGAGCTCT CTATTCCCGA CATACCCTTC GTTTCTCGGA GCTTCTCATC ATCATCATCA TGTCGTCGAT GGAGCCGGTC ATCTTCAGCT CTTTAGTACG AATTCAAATA CCGCCTCGCA GCAACAGTTG ATCACGGGTA ATACGAGTTT GATTAGACCA TTTCATCATT TGATGAGCTC GAATCATGAT ACGGATCGTC ATAGTAGCGA TAATGAATCA GATTC 
Length1105
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18609043.. 18610554
Download Sequence
A.thaliana
AGI-codeAT5G60970.1
DescriptionTEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5
TAIR curator summaryTCP gene involved in heterochronic control of leaf differentiation.
Alias[TCP5][TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg928358 pigment defective 320
23.7697 Ahg484365 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
24.9399 Ahg925447 RNA polymerase subunit alpha
25.5539 Ahg942308 Ribosomal L18p/L5e family protein
33.2866 Ahg951589 Tetratricopeptide repeat (TPR)-like superfamily protein
37.8682 Ahg916789
40.2492 Ahg490319 DNA mismatch repair protein, putative
43.589 Ahg472828 3-ketoacyl-CoA synthase 5
50.6458 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
63.6632 Ahg930789 ferredoxin thioredoxin reductase catalytic beta chain family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression