Detail



ID : CBF1_halleri

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Description
Sequence
ATGAACTCAT TTTCTGCTTT TTCTGAAATG TTTGGCTCCG ATGGCGAGTC TCAAGTTTCT TCAGGCGGAG ATTATTGTCC GAAGTTGGCG ACAAGCTGTC CGAAGAAACC GGCTGGTCGA AAGAAGTTTC GCGAAACTCG TCACCCAATT TACAGAGGAG TTCGTCGGAG AAACTCCGGT AAGTGGGTGT GTGAAGTGAG AGAGCCAAAC AAGAAGTCAA GGATTTGGCT TGGAACTTTC CAAACCGCAG AGATGGCAGC TCGTGCTCAC GATGTCGCCG CATTAGCCCT CCGCGGCAGA TCAGCCTGTC TCAATTTTGC TGACTCGGCT TGGCGGCTAC GAATCCCCGA ATCAACAAGC GCCAAAGATA TCCAGAAAGC TGCGGCTGAA GCGGCGTTGG CTTTCCAAGA TGAGAGGTGT GATACGACCA ATGATCATGG CCTGGACATG GAGGAGACGA TGGTGGAAGC TATTTATACG CCGGAACAGA GCGAAGATGC GTTTTATATG GATGAGGAGA CGATGATTGG GATGCCGAGT TTGTTGGATA ATATGGCCCA AGGAATGCTC TTGCCGCCGC CGTCCGTTCA ATGGAACTAT AATTACGACG GCGAGGGAGA TGGTGACGTG TCGTTGTGGA GTTTTTAA 
Length648
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G25490.1
DescriptionC-repeat/DRE binding factor 1
TAIR curator summaryTranscriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.
Alias[ATCBF1][CBF1][DREB1B][C-repeat/DRE binding factor 1][DRE BINDING PROTEIN 1B]
Gene coexpression
MR
MR Locus Description
1 CBF3_halleri dehydration response element B1A
1.41421 CBF2_halleri C-repeat/DRE binding factor 2
3.31662 Ahg949750 C-repeat-binding factor 4
5.19615 Ahg487335 DRE-binding protein 2A
10.9545 Ahg926394 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
15.6525 Ahg474828
15.8745 Ahg475300 ARM repeat superfamily protein
18.6548 Ahg910871 Protein of unknown function (DUF761)
18.9737 Ahg334956
21.4243 Ahg496967 Dehydrin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression