| Annotation |
|---|
| Description | |
| Sequence |
ATGAACTCAT CATTTTCTGC CTTTTCTGAA ATGTTTGGCT CCGACTACGA GTCCTCAGGC GGCGATTATA TTCCGACATT GGCGACAAGC TGTCCCAAGA AACCTGCCGG AAGGAAGAAG TTTCGTGAGA CTCGTCACCC AATTTACAGA GGAGTTCGTC TAAGAAACTC CGGTAAGTGG GTGTGTGAGT TGAGAGAGCC AAACAAGAAA ACGAGGATTT GGCTGGGGAC TTTCCAAACC GCTGAGATGG CCGCTCGTGC TCACGACGTC GCCGCCATAG CTCTCCGTGG CAGATCAGCC TGTCTCAATT TCGCTGACTC GGCTTGGAGG CTACGAATCC CCGAGTCAAC GTGCGCCAAG GAAATCCAAA AGGCAGCGGC TGAAGCCGCG ATGGCTTTTC AATATGAGAT GTGTGATACG ACGACGACGG ATCATGGCCT TGACATGGAA GAGACGATGG TGGAAGCTAT TGTAACGCCG GAACAGAGCG ACGCTTTTTA TTTAGACGAC GAGGCGATAT TCGGGATGTC TAGTTTGTTG GATAATATGG CCGAAGGAAT GCTCTTGCCG CCGCCGTCCG TTCAATGGAA CTATAATTTT GATGTCGAGG GAGATGATGA CGTGTCGTTA TGGAGTTATT AA |
| Length | 642 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT4G25470.1 |
| Description | C-repeat/DRE binding factor 2 |
| TAIR curator summary | Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway. |
| Alias | [ATCBF2][CBF2][DREB1C][FTQ4][C-repeat/DRE binding factor 2][DRE/CRT-BINDING PROTEIN 1C][FREEZING TOLERANCE QTL 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
CBF1_halleri | C-repeat/DRE binding factor 1 |
| 2 |
CBF3_halleri | dehydration response element B1A |
| 5.2915 |
Ahg487335 | DRE-binding protein 2A |
| 7.07107 |
Ahg949750 | C-repeat-binding factor 4 |
| 8.66025 |
Ahg485985 | Regulator of chromosome condensation (RCC1) family protein |
| 9.94987 |
Ahg475300 | ARM repeat superfamily protein |
| 12.6095 |
Ahg485918 | Integrase-type DNA-binding superfamily protein |
| 13.784 |
Ahg941255 | |
| 14.4914 |
Ahg920198 | related to ABI3/VP1 1 |
| 15.2971 |
Ahg939830 | zinc finger of Arabidopsis thaliana 6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|